Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AC012569.1-201ENST00000591191 1524 ntBASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 AL023806.1-201ENST00000603994 1649 ntBASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SWSAP1Q6NVH7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 AC106820.2-201ENST00000563775 3264 ntBASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 ACTG1P14-201ENST00000446382 1122 ntBASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 SLC22A20-204ENST00000530038 1673 ntBASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 AL021920.2-201ENST00000624828 1351 ntBASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SWSAP1Q6NVH7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 AC140658.5-201ENST00000438532 169 ntBASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 AC112191.1-201ENST00000523689 701 ntBASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 SNHG9-202ENST00000564014 471 ntBASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SWSAP1Q6NVH7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms