Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 NME2P1-201ENST00000426182 414 ntBASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 EGFEM1P-202ENST00000431685 1563 ntBASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD4Q5XG99 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 AC098818.2-201ENST00000564925 2320 ntBASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 AC131009.4-201ENST00000624048 1740 ntBASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 ABALON-201ENST00000629058 1903 ntBASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 TSSK5P-201ENST00000423978 907 ntBASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 AC142381.1-201ENST00000426099 345 ntBASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 AC021097.1-201ENST00000607902 574 ntBASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD4Q5XG99 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LYSMD4Q5XG99 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 AC007274.1-201ENST00000439805 662 ntBASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 MPDU1-223ENST00000582151 728 ntBASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
LYSMD4Q5XG99 AL359881.2-201ENST00000602973 570 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms