Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 FRMD8P1-201ENST00000440433 1524 ntBASIC17.99■□□□□ 0.47
VARS2Q5ST30 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 KRT8P48-201ENST00000515599 1220 ntBASIC17.99■□□□□ 0.47
VARS2Q5ST30 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 DUX4L17-201ENST00000557360 1267 ntBASIC17.99■□□□□ 0.47
VARS2Q5ST30 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 AC093028.1-201ENST00000622998 982 ntBASIC17.99■□□□□ 0.47
VARS2Q5ST30 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 AC067852.2-201ENST00000590513 2313 ntBASIC17.99■□□□□ 0.47
VARS2Q5ST30 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 SLC22A20-204ENST00000530038 1673 ntBASIC17.99■□□□□ 0.47
VARS2Q5ST30 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.98■□□□□ 0.47
VARS2Q5ST30 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
VARS2Q5ST30 HCG4-201ENST00000418983 998 ntBASIC17.98■□□□□ 0.47
VARS2Q5ST30 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.98■□□□□ 0.47
VARS2Q5ST30 SPDYE11-202ENST00000450699 704 ntBASIC17.98■□□□□ 0.47
VARS2Q5ST30 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.98■□□□□ 0.47
VARS2Q5ST30 AC023141.5-201ENST00000458585 616 ntBASIC17.98■□□□□ 0.47
VARS2Q5ST30 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 SPDYE9P-201ENST00000570642 692 ntBASIC17.98■□□□□ 0.47
VARS2Q5ST30 AC091167.2-201ENST00000579581 588 ntBASIC17.98■□□□□ 0.47
VARS2Q5ST30 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.98■□□□□ 0.47
VARS2Q5ST30 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.98■□□□□ 0.47
VARS2Q5ST30 AL009183.1-201ENST00000603760 355 ntBASIC17.98■□□□□ 0.47
VARS2Q5ST30 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.98■□□□□ 0.47
VARS2Q5ST30 SPDYE10P-202ENST00000612005 668 ntBASIC17.98■□□□□ 0.47
VARS2Q5ST30 SPDYE8P-202ENST00000612377 668 ntBASIC17.98■□□□□ 0.47
VARS2Q5ST30 AC106028.4-201ENST00000614509 607 ntBASIC17.98■□□□□ 0.47
VARS2Q5ST30 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.98■□□□□ 0.47
VARS2Q5ST30 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VARS2Q5ST30 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VARS2Q5ST30 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 TFAMP1-201ENST00000412727 736 ntBASIC17.97■□□□□ 0.47
VARS2Q5ST30 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 CROCCP2-202ENST00000412962 2773 ntBASIC17.97■□□□□ 0.47
VARS2Q5ST30 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VARS2Q5ST30 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.97■□□□□ 0.47
VARS2Q5ST30 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms