Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB6CQ53S08 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB6CQ53S08 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RAB6CQ53S08 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 AL603756.1-201ENST00000606511 2163 ntBASIC17.7■□□□□ 0.42
RAB6CQ53S08 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 AC026396.1-201ENST00000419388 421 ntBASIC17.7■□□□□ 0.42
RAB6CQ53S08 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 UNC93B6-202ENST00000528242 690 ntBASIC17.7■□□□□ 0.42
RAB6CQ53S08 AC107918.2-201ENST00000530817 355 ntBASIC17.7■□□□□ 0.42
RAB6CQ53S08 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 PCDHA14-201ENST00000506751 2298 ntBASIC17.7■□□□□ 0.42
RAB6CQ53S08 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB6CQ53S08 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB6CQ53S08 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 RNA5SP415-201ENST00000517246 115 ntBASIC17.69■□□□□ 0.42
RAB6CQ53S08 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 MIR1199-201ENST00000621445 119 ntBASIC17.69■□□□□ 0.42
RAB6CQ53S08 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB6CQ53S08 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB6CQ53S08 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB6CQ53S08 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB6CQ53S08 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB6CQ53S08 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAB6CQ53S08 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB6CQ53S08 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB6CQ53S08 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB6CQ53S08 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB6CQ53S08 AC009947.1-201ENST00000444350 727 ntBASIC17.68■□□□□ 0.42
RAB6CQ53S08 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB6CQ53S08 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB6CQ53S08 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms