Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC96Q2M329 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC96Q2M329 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC96Q2M329 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC96Q2M329 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC96Q2M329 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC96Q2M329 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC96Q2M329 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC96Q2M329 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 AC129492.6-201ENST00000611383 1305 ntBASIC19.83■□□□□ 0.77
CCDC96Q2M329 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 RPS8P6-201ENST00000426177 609 ntBASIC19.83■□□□□ 0.77
CCDC96Q2M329 AC107918.2-201ENST00000530817 355 ntBASIC19.83■□□□□ 0.77
CCDC96Q2M329 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC96Q2M329 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC96Q2M329 AC116353.5-201ENST00000638148 1699 ntBASIC19.83■□□□□ 0.76
CCDC96Q2M329 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC96Q2M329 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC96Q2M329 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC96Q2M329 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
CCDC96Q2M329 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC96Q2M329 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC96Q2M329 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC96Q2M329 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC96Q2M329 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC96Q2M329 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC96Q2M329 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC96Q2M329 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms