Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CLK3P2-201ENST00000427566 1453 ntBASIC22.57■■□□□ 1.2
COL16A1Q07092 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL16A1Q07092 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC22.57■■□□□ 1.2
COL16A1Q07092 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
COL16A1Q07092 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC22.57■■□□□ 1.2
COL16A1Q07092 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC22.57■■□□□ 1.2
COL16A1Q07092 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL16A1Q07092 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL16A1Q07092 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL16A1Q07092 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL16A1Q07092 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL16A1Q07092 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
COL16A1Q07092 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL16A1Q07092 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC22.57■■□□□ 1.2
COL16A1Q07092 FO681548.1-201ENST00000455617 1132 ntBASIC22.57■■□□□ 1.2
COL16A1Q07092 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
COL16A1Q07092 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC22.57■■□□□ 1.2
COL16A1Q07092 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC22.57■■□□□ 1.2
COL16A1Q07092 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC22.57■■□□□ 1.2
COL16A1Q07092 AC106872.11-201ENST00000605838 421 ntBASIC22.57■■□□□ 1.2
COL16A1Q07092 AL033527.5-202ENST00000641632 1098 ntBASIC22.57■■□□□ 1.2
COL16A1Q07092 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.57■■□□□ 1.2
COL16A1Q07092 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC22.56■■□□□ 1.2
COL16A1Q07092 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.56■■□□□ 1.2
COL16A1Q07092 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.56■■□□□ 1.2
COL16A1Q07092 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.56■■□□□ 1.2
COL16A1Q07092 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
COL16A1Q07092 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
COL16A1Q07092 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC22.56■■□□□ 1.2
COL16A1Q07092 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
COL16A1Q07092 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
COL16A1Q07092 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 FXNP2-201ENST00000411625 547 ntBASIC22.56■■□□□ 1.2
COL16A1Q07092 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL16A1Q07092 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
COL16A1Q07092 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
COL16A1Q07092 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC22.56■■□□□ 1.2
COL16A1Q07092 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC22.56■■□□□ 1.2
COL16A1Q07092 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL16A1Q07092 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC22.56■■□□□ 1.2
COL16A1Q07092 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL16A1Q07092 CDC14C-201ENST00000428251 1719 ntBASIC22.55■■□□□ 1.2
COL16A1Q07092 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC22.55■■□□□ 1.2
COL16A1Q07092 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.55■■□□□ 1.2
COL16A1Q07092 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
COL16A1Q07092 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.55■■□□□ 1.2
COL16A1Q07092 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL16A1Q07092 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL16A1Q07092 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL16A1Q07092 RHOA-206ENST00000454011 889 ntTSL 2 BASIC22.55■■□□□ 1.2
COL16A1Q07092 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC22.55■■□□□ 1.2
COL16A1Q07092 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC22.55■■□□□ 1.2
COL16A1Q07092 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC22.55■■□□□ 1.2
COL16A1Q07092 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC22.55■■□□□ 1.2
COL16A1Q07092 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC22.55■■□□□ 1.2
COL16A1Q07092 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL16A1Q07092 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL16A1Q07092 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL16A1Q07092 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL16A1Q07092 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL16A1Q07092 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL16A1Q07092 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL16A1Q07092 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL16A1Q07092 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
COL16A1Q07092 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC22.54■■□□□ 1.2
COL16A1Q07092 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC22.54■■□□□ 1.2
COL16A1Q07092 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC22.54■■□□□ 1.2
COL16A1Q07092 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC22.54■■□□□ 1.2
COL16A1Q07092 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.54■■□□□ 1.2
COL16A1Q07092 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL16A1Q07092 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC22.54■■□□□ 1.2
COL16A1Q07092 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
COL16A1Q07092 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL16A1Q07092 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL16A1Q07092 LYSMD4-203ENST00000378904 2122 ntBASIC22.54■■□□□ 1.2
COL16A1Q07092 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
COL16A1Q07092 REXO1L9P-201ENST00000604264 2108 ntBASIC22.54■■□□□ 1.2
COL16A1Q07092 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC22.54■■□□□ 1.2
COL16A1Q07092 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL16A1Q07092 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC22.54■■□□□ 1.2
COL16A1Q07092 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC22.53■■□□□ 1.2
COL16A1Q07092 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC22.53■■□□□ 1.2
COL16A1Q07092 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL16A1Q07092 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC22.53■■□□□ 1.2
COL16A1Q07092 MPDU1-223ENST00000582151 728 ntBASIC22.53■■□□□ 1.2
COL16A1Q07092 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC22.53■■□□□ 1.2
COL16A1Q07092 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms