Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNA1P78396 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNA1P78396 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCNA1P78396 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.27■□□□□ 0.68
CCNA1P78396 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCNA1P78396 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCNA1P78396 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
CCNA1P78396 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 AC016027.1-202ENST00000607927 1699 ntBASIC19.27■□□□□ 0.68
CCNA1P78396 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCNA1P78396 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.27■□□□□ 0.68
CCNA1P78396 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.27■□□□□ 0.68
CCNA1P78396 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 GNAS-203ENST00000306120 1878 ntBASIC19.27■□□□□ 0.68
CCNA1P78396 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CCNA1P78396 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCNA1P78396 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CCNA1P78396 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.27■□□□□ 0.68
CCNA1P78396 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.27■□□□□ 0.68
CCNA1P78396 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.27■□□□□ 0.68
CCNA1P78396 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.27■□□□□ 0.68
CCNA1P78396 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCNA1P78396 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 AC131009.4-201ENST00000624048 1740 ntBASIC19.27■□□□□ 0.68
CCNA1P78396 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCNA1P78396 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.27■□□□□ 0.67
CCNA1P78396 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCNA1P78396 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.27■□□□□ 0.67
CCNA1P78396 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CCNA1P78396 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCNA1P78396 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCNA1P78396 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCNA1P78396 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCNA1P78396 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.26■□□□□ 0.67
CCNA1P78396 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCNA1P78396 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCNA1P78396 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
CCNA1P78396 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.26■□□□□ 0.67
CCNA1P78396 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCNA1P78396 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCNA1P78396 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CCNA1P78396 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCNA1P78396 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCNA1P78396 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.26■□□□□ 0.67
CCNA1P78396 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.26■□□□□ 0.67
CCNA1P78396 AC241585.1-201ENST00000433527 519 ntBASIC19.26■□□□□ 0.67
CCNA1P78396 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCNA1P78396 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCNA1P78396 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.26■□□□□ 0.67
CCNA1P78396 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.26■□□□□ 0.67
CCNA1P78396 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCNA1P78396 MPDU1-223ENST00000582151 728 ntBASIC19.26■□□□□ 0.67
CCNA1P78396 MIR4453-201ENST00000584019 89 ntBASIC19.26■□□□□ 0.67
CCNA1P78396 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.26■□□□□ 0.67
CCNA1P78396 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.26■□□□□ 0.67
CCNA1P78396 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCNA1P78396 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCNA1P78396 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 AC016396.2-201ENST00000562575 1417 ntBASIC19.25■□□□□ 0.67
CCNA1P78396 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCNA1P78396 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 AL021920.2-201ENST00000624828 1351 ntBASIC19.25■□□□□ 0.67
CCNA1P78396 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCNA1P78396 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.25■□□□□ 0.67
CCNA1P78396 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.25■□□□□ 0.67
CCNA1P78396 AC027307.3-201ENST00000594262 1100 ntBASIC19.25■□□□□ 0.67
CCNA1P78396 AC021097.1-201ENST00000607902 574 ntBASIC19.25■□□□□ 0.67
CCNA1P78396 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCNA1P78396 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCNA1P78396 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms