Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 MCCD1P1-208ENST00000445732 328 ntBASIC12.84□□□□□ -0.35
HIST1H2BDP58876 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H2BDP58876 REXO1L2P-201ENST00000425429 2069 ntBASIC12.84□□□□□ -0.35
HIST1H2BDP58876 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H2BDP58876 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H2BDP58876 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H2BDP58876 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H2BDP58876 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H2BDP58876 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
HIST1H2BDP58876 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.83□□□□□ -0.35
HIST1H2BDP58876 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.83□□□□□ -0.35
HIST1H2BDP58876 PTENP1-202ENST00000532280 3996 ntBASIC12.83□□□□□ -0.36
HIST1H2BDP58876 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 COX20-201ENST00000366528 568 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 RARRES2P10-201ENST00000564312 460 ntBASIC12.83□□□□□ -0.36
HIST1H2BDP58876 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 MAG-206ENST00000597035 542 ntTSL 4 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 AL645728.1-201ENST00000366221 2101 ntBASIC12.83□□□□□ -0.36
HIST1H2BDP58876 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H2BDP58876 KRT17P1-201ENST00000399211 1546 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms