Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 KRT19P2-202ENST00000557173 1012 ntBASIC17.39■□□□□ 0.37
CDH4P55283 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.39■□□□□ 0.37
CDH4P55283 AC091167.2-201ENST00000579581 588 ntBASIC17.39■□□□□ 0.37
CDH4P55283 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH4P55283 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH4P55283 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH4P55283 AC092865.6-201ENST00000642101 219 ntBASIC17.39■□□□□ 0.37
CDH4P55283 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH4P55283 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CDH4P55283 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDH4P55283 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 AC025580.3-201ENST00000617932 1424 ntBASIC17.38■□□□□ 0.37
CDH4P55283 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDH4P55283 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 AP001094.4-201ENST00000579008 2176 ntBASIC17.38■□□□□ 0.37
CDH4P55283 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDH4P55283 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH4P55283 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CDH4P55283 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH4P55283 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH4P55283 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
CDH4P55283 PDPK2P-202ENST00000562415 1191 ntBASIC17.38■□□□□ 0.37
CDH4P55283 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH4P55283 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 AL513190.1-201ENST00000621254 727 ntBASIC17.38■□□□□ 0.37
CDH4P55283 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDH4P55283 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH4P55283 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 AC092068.3-201ENST00000587894 2016 ntBASIC17.38■□□□□ 0.37
CDH4P55283 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH4P55283 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH4P55283 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH4P55283 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDH4P55283 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 BX842568.4-201ENST00000421222 227 ntBASIC17.37■□□□□ 0.37
CDH4P55283 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH4P55283 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CDH4P55283 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH4P55283 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH4P55283 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH4P55283 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.37■□□□□ 0.37
CDH4P55283 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH4P55283 MIR4515-201ENST00000584082 81 ntBASIC17.37■□□□□ 0.37
CDH4P55283 AL645728.2-201ENST00000641974 660 ntBASIC17.37■□□□□ 0.37
CDH4P55283 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDH4P55283 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH4P55283 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH4P55283 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH4P55283 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH4P55283 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CDH4P55283 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH4P55283 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH4P55283 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH4P55283 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH4P55283 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH4P55283 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms