Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.91■□□□□ 0.14
PSMD4P55036 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.91■□□□□ 0.14
PSMD4P55036 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.91■□□□□ 0.14
PSMD4P55036 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.91■□□□□ 0.14
PSMD4P55036 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.91■□□□□ 0.14
PSMD4P55036 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 UNC93B7-201ENST00000509439 705 ntBASIC15.91■□□□□ 0.14
PSMD4P55036 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PSMD4P55036 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.91■□□□□ 0.14
PSMD4P55036 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.91■□□□□ 0.14
PSMD4P55036 SART3-203ENST00000546611 1184 ntBASIC15.91■□□□□ 0.14
PSMD4P55036 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.91■□□□□ 0.14
PSMD4P55036 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.91■□□□□ 0.14
PSMD4P55036 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.91■□□□□ 0.14
PSMD4P55036 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PSMD4P55036 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.91■□□□□ 0.14
PSMD4P55036 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PSMD4P55036 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PSMD4P55036 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.9■□□□□ 0.14
PSMD4P55036 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PSMD4P55036 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.9■□□□□ 0.14
PSMD4P55036 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 AC009053.2-201ENST00000563701 2365 ntBASIC15.9■□□□□ 0.14
PSMD4P55036 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.9■□□□□ 0.14
PSMD4P55036 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.9■□□□□ 0.14
PSMD4P55036 EMBP1-201ENST00000458200 901 ntBASIC15.9■□□□□ 0.14
PSMD4P55036 AF186996.4-201ENST00000467186 377 ntBASIC15.9■□□□□ 0.14
PSMD4P55036 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.9■□□□□ 0.14
PSMD4P55036 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.9■□□□□ 0.14
PSMD4P55036 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.9■□□□□ 0.14
PSMD4P55036 RN7SL510P-201ENST00000581311 263 ntBASIC15.9■□□□□ 0.14
PSMD4P55036 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 AC006557.2-201ENST00000592985 1240 ntBASIC15.9■□□□□ 0.14
PSMD4P55036 AC004817.3-201ENST00000602957 2129 ntBASIC15.9■□□□□ 0.14
PSMD4P55036 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PSMD4P55036 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PSMD4P55036 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PSMD4P55036 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.89■□□□□ 0.13
PSMD4P55036 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PSMD4P55036 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PSMD4P55036 LAGE3P1-201ENST00000425356 484 ntBASIC15.89■□□□□ 0.13
PSMD4P55036 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PSMD4P55036 TPM4P1-201ENST00000436100 807 ntBASIC15.89■□□□□ 0.13
PSMD4P55036 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.89■□□□□ 0.13
PSMD4P55036 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.89■□□□□ 0.13
PSMD4P55036 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.89■□□□□ 0.13
PSMD4P55036 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.89■□□□□ 0.13
PSMD4P55036 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.89■□□□□ 0.13
PSMD4P55036 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PSMD4P55036 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PSMD4P55036 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms