Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.75■□□□□ 0.59
PMS1P54277 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.75■□□□□ 0.59
PMS1P54277 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PMS1P54277 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.75■□□□□ 0.59
PMS1P54277 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.75■□□□□ 0.59
PMS1P54277 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.75■□□□□ 0.59
PMS1P54277 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 AL139288.1-201ENST00000623748 933 ntBASIC18.75■□□□□ 0.59
PMS1P54277 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.75■□□□□ 0.59
PMS1P54277 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PMS1P54277 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.75■□□□□ 0.59
PMS1P54277 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
PMS1P54277 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
PMS1P54277 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PMS1P54277 TUBB8P12-201ENST00000308911 1335 ntBASIC18.74■□□□□ 0.59
PMS1P54277 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PMS1P54277 TUBB7P-202ENST00000428444 1305 ntBASIC18.74■□□□□ 0.59
PMS1P54277 TUBB8P7-204ENST00000567960 1332 ntBASIC18.74■□□□□ 0.59
PMS1P54277 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.74■□□□□ 0.59
PMS1P54277 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.74■□□□□ 0.59
PMS1P54277 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PMS1P54277 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.74■□□□□ 0.59
PMS1P54277 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.74■□□□□ 0.59
PMS1P54277 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.74■□□□□ 0.59
PMS1P54277 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.74■□□□□ 0.59
PMS1P54277 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.74■□□□□ 0.59
PMS1P54277 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.74■□□□□ 0.59
PMS1P54277 TERC-201ENST00000602385 541 ntBASIC18.74■□□□□ 0.59
PMS1P54277 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PMS1P54277 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PMS1P54277 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.74■□□□□ 0.59
PMS1P54277 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.74■□□□□ 0.59
PMS1P54277 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 AC092364.2-201ENST00000596710 2692 ntBASIC18.74■□□□□ 0.59
PMS1P54277 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 NCF1C-201ENST00000438382 1427 ntBASIC18.74■□□□□ 0.59
PMS1P54277 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PMS1P54277 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 AC006449.5-201ENST00000610658 2098 ntBASIC18.73■□□□□ 0.59
PMS1P54277 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PMS1P54277 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.73■□□□□ 0.59
PMS1P54277 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.73■□□□□ 0.59
PMS1P54277 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.73■□□□□ 0.59
PMS1P54277 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.73■□□□□ 0.59
PMS1P54277 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.73■□□□□ 0.59
PMS1P54277 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.73■□□□□ 0.59
PMS1P54277 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.73■□□□□ 0.59
PMS1P54277 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.73■□□□□ 0.59
PMS1P54277 AL121772.3-201ENST00000610840 674 ntBASIC18.73■□□□□ 0.59
PMS1P54277 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.73■□□□□ 0.59
PMS1P54277 REXO1L6P-202ENST00000619970 1078 ntBASIC18.73■□□□□ 0.59
PMS1P54277 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms