Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 KRT8P49-201ENST00000604166 1432 ntBASIC15.16■□□□□ 0.02
SLC25A1P53007 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC25A1P53007 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 AC026691.1-201ENST00000602502 2017 ntBASIC15.16■□□□□ 0.02
SLC25A1P53007 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC25A1P53007 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC25A1P53007 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SLC25A1P53007 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
SLC25A1P53007 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC25A1P53007 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SLC25A1P53007 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC25A1P53007 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SLC25A1P53007 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC25A1P53007 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SLC25A1P53007 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC25A1P53007 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC25A1P53007 AC087388.1-201ENST00000571370 1112 ntBASIC15.15■□□□□ 0.02
SLC25A1P53007 MIR5100-201ENST00000579544 119 ntBASIC15.15■□□□□ 0.02
SLC25A1P53007 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SLC25A1P53007 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC25A1P53007 AL590326.2-201ENST00000625139 305 ntBASIC15.15■□□□□ 0.02
SLC25A1P53007 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SLC25A1P53007 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
SLC25A1P53007 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC25A1P53007 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC25A1P53007 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC25A1P53007 AC006538.1-201ENST00000567905 1585 ntBASIC15.15■□□□□ 0.02
SLC25A1P53007 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC25A1P53007 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC25A1P53007 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.02
SLC25A1P53007 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC25A1P53007 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SLC25A1P53007 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC25A1P53007 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC25A1P53007 PRYP5-201ENST00000451909 266 ntBASIC15.14■□□□□ 0.01
SLC25A1P53007 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC25A1P53007 AP000867.3-201ENST00000524675 377 ntBASIC15.14■□□□□ 0.01
SLC25A1P53007 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC25A1P53007 TERC-201ENST00000602385 541 ntBASIC15.14■□□□□ 0.01
SLC25A1P53007 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC25A1P53007 AP000550.4-202ENST00000639755 178 ntBASIC15.14■□□□□ 0.01
SLC25A1P53007 AL139011.1-202ENST00000642063 584 ntBASIC15.14■□□□□ 0.01
SLC25A1P53007 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
SLC25A1P53007 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC25A1P53007 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC25A1P53007 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC25A1P53007 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC25A1P53007 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC25A1P53007 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC25A1P53007 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC25A1P53007 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC25A1P53007 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC25A1P53007 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms