Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 API5-201ENST00000378852 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.775e-6■□□□□ 9.4
NCBP2P52298 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.73□□□□□ -1.815e-6■□□□□ 9.4
NCBP2P52298 CTCF-203ENST00000566078 1627 ntTSL 228.8■■■□□ 2.27e-8■□□□□ 9.4
NCBP2P52298 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.69■□□□□ 0.747e-8■□□□□ 9.4
NCBP2P52298 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.077e-8■□□□□ 9.4
NCBP2P52298 RPL10-217ENST00000492572 1656 ntTSL 516.31■□□□□ 0.22e-9■□□□□ 9.4
NCBP2P52298 RPL10-210ENST00000458500 585 ntTSL 1 (best)12.18□□□□□ -0.462e-9■□□□□ 9.4
NCBP2P52298 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.482e-9■□□□□ 9.4
NCBP2P52298 RPL10-212ENST00000479366 569 ntTSL 412.03□□□□□ -0.482e-9■□□□□ 9.4
NCBP2P52298 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC12.01□□□□□ -0.492e-9■□□□□ 9.4
NCBP2P52298 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.592e-9■□□□□ 9.4
NCBP2P52298 RPL10-215ENST00000489200 1519 ntTSL 211.31□□□□□ -0.62e-9■□□□□ 9.4
NCBP2P52298 RPL10-207ENST00000436473 657 ntTSL 210.99□□□□□ -0.652e-9■□□□□ 9.4
NCBP2P52298 RPL10-214ENST00000485196 839 ntTSL 210.65□□□□□ -0.72e-9■□□□□ 9.4
NCBP2P52298 RPL10-213ENST00000482732 1731 ntTSL 1 (best)10.59□□□□□ -0.712e-9■□□□□ 9.4
NCBP2P52298 RPL10-201ENST00000344746 2278 ntAPPRIS P1 TSL 1 (best)10.21□□□□□ -0.772e-9■□□□□ 9.4
NCBP2P52298 RPL10-216ENST00000491035 1369 ntTSL 510.15□□□□□ -0.782e-9■□□□□ 9.4
NCBP2P52298 TTC28-204ENST00000468807 594 ntTSL 219.84■□□□□ 0.771e-8■□□□□ 9.4
NCBP2P52298 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.74■□□□□ 0.431e-8■□□□□ 9.4
NCBP2P52298 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.621e-8■□□□□ 9.4
NCBP2P52298 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.283e-14■□□□□ 9.4
NCBP2P52298 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.563e-10■□□□□ 9.4
NCBP2P52298 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.193e-10■□□□□ 9.4
NCBP2P52298 SEC61G-205ENST00000460484 1227 ntTSL 1 (best)8.34□□□□□ -1.073e-10■□□□□ 9.4
NCBP2P52298 SEC61G-207ENST00000480303 661 ntTSL 1 (best)8.1□□□□□ -1.113e-10■□□□□ 9.4
NCBP2P52298 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.243e-10■□□□□ 9.4
NCBP2P52298 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.433e-10■□□□□ 9.4
NCBP2P52298 SEC61G-206ENST00000461536 437 ntTSL 24.13□□□□□ -1.753e-10■□□□□ 9.4
NCBP2P52298 BET1L-205ENST00000479463 684 ntTSL 319.81■□□□□ 0.764e-8■□□□□ 9.4
NCBP2P52298 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.08■□□□□ 0.644e-8■□□□□ 9.4
NCBP2P52298 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.68■□□□□ 0.584e-8■□□□□ 9.4
NCBP2P52298 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.58■□□□□ 0.244e-8■□□□□ 9.4
NCBP2P52298 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.174e-8■□□□□ 9.4
NCBP2P52298 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.55□□□□□ -0.084e-8■□□□□ 9.4
NCBP2P52298 UNC13D-213ENST00000590762 848 ntTSL 520.04■□□□□ 0.85e-8■□□□□ 9.4
NCBP2P52298 UNC13D-211ENST00000588774 938 ntTSL 319.96■□□□□ 0.795e-8■□□□□ 9.4
NCBP2P52298 UNC13D-203ENST00000585574 658 ntTSL 315.88■□□□□ 0.135e-8■□□□□ 9.4
NCBP2P52298 UNC13D-205ENST00000586147 589 ntTSL 512.99□□□□□ -0.335e-8■□□□□ 9.4
NCBP2P52298 UNC13D-210ENST00000587504 1050 ntTSL 512.33□□□□□ -0.445e-8■□□□□ 9.4
NCBP2P52298 UNC13D-215ENST00000591563 4382 ntTSL 212.15□□□□□ -0.464e-8■□□□□ 9.4
NCBP2P52298 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC11.82□□□□□ -0.525e-8■□□□□ 9.4
NCBP2P52298 UNC13D-217ENST00000592386 930 ntTSL 58.99□□□□□ -0.975e-8■□□□□ 9.4
NCBP2P52298 BCL2L2-203ENST00000554635 545 ntTSL 1 (best)13.03□□□□□ -0.321e-7■□□□□ 9.4
NCBP2P52298 NMNAT1-203ENST00000462686 1818 ntTSL 515.47■□□□□ 0.075e-6■□□□□ 9.3
NCBP2P52298 NMNAT1-202ENST00000403197 1094 ntTSL 2 BASIC9.28□□□□□ -0.925e-6■□□□□ 9.3
NCBP2P52298 NMNAT1-201ENST00000377205 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.975e-6■□□□□ 9.3
NCBP2P52298 NMNAT1-204ENST00000492735 514 ntTSL 35.68□□□□□ -1.55e-6■□□□□ 9.3
NCBP2P52298 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.43□□□□□ -2.025e-6■□□□□ 9.3
NCBP2P52298 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.06■□□□□ 0.481e-8■□□□□ 9.3
NCBP2P52298 ASGR1-206ENST00000573596 2083 ntTSL 517.07■□□□□ 0.321e-8■□□□□ 9.3
NCBP2P52298 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.251e-8■□□□□ 9.3
NCBP2P52298 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.68□□□□□ -0.381e-8■□□□□ 9.3
NCBP2P52298 ASGR1-205ENST00000573083 855 ntTSL 39.22□□□□□ -0.931e-8■□□□□ 9.3
NCBP2P52298 OIP5-AS1-205ENST00000558945 1269 ntTSL 520.74■□□□□ 0.915e-19■□□□□ 9.3
NCBP2P52298 OIP5-AS1-206ENST00000559368 642 ntTSL 320.74■□□□□ 0.915e-19■□□□□ 9.3
NCBP2P52298 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.74■□□□□ 0.915e-19■□□□□ 9.3
NCBP2P52298 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.84■□□□□ 0.775e-19■□□□□ 9.3
NCBP2P52298 GCFC2-204ENST00000442309 642 ntTSL 519.02■□□□□ 0.643e-6■□□□□ 9.3
NCBP2P52298 ERI2-213ENST00000568251 587 ntTSL 218.84■□□□□ 0.613e-6■□□□□ 9.3
NCBP2P52298 ERI2-210ENST00000566223 558 ntTSL 418.17■□□□□ 0.53e-6■□□□□ 9.3
NCBP2P52298 ERI2-211ENST00000567562 557 ntTSL 518.17■□□□□ 0.53e-6■□□□□ 9.3
NCBP2P52298 SPATA13-209ENST00000466831 2191 ntTSL 218.08■□□□□ 0.493e-6■□□□□ 9.3
NCBP2P52298 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.43■□□□□ 0.383e-6■□□□□ 9.3
NCBP2P52298 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.44■□□□□ 0.063e-6■□□□□ 9.3
NCBP2P52298 COQ5-204ENST00000547448 701 ntTSL 314.87□□□□□ -0.033e-6■□□□□ 9.3
NCBP2P52298 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.043e-6■□□□□ 9.3
NCBP2P52298 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.64□□□□□ -0.075e-19■□□□□ 9.3
NCBP2P52298 COG2-204ENST00000473671 436 ntTSL 214.63□□□□□ -0.073e-6■□□□□ 9.3
NCBP2P52298 COQ5-205ENST00000547736 574 ntTSL 414.07□□□□□ -0.163e-6■□□□□ 9.3
NCBP2P52298 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.96□□□□□ -0.173e-6■□□□□ 9.3
NCBP2P52298 CDC23-207ENST00000483961 549 ntTSL 413.9□□□□□ -0.183e-6■□□□□ 9.3
NCBP2P52298 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.9□□□□□ -0.183e-6■□□□□ 9.3
NCBP2P52298 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.86□□□□□ -0.193e-6■□□□□ 9.3
NCBP2P52298 MRPS27-203ENST00000506957 513 ntTSL 413.78□□□□□ -0.23e-6■□□□□ 9.3
NCBP2P52298 RPL23A-209ENST00000582736 595 ntTSL 1 (best)13.05□□□□□ -0.323e-6■□□□□ 9.3
NCBP2P52298 SNRNP40-203ENST00000463988 677 ntTSL 213.03□□□□□ -0.323e-6■□□□□ 9.3
NCBP2P52298 CCDC58-207ENST00000498466 683 ntTSL 212.4□□□□□ -0.423e-6■□□□□ 9.3
NCBP2P52298 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.433e-6■□□□□ 9.3
NCBP2P52298 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.433e-6■□□□□ 9.3
NCBP2P52298 COQ5-207ENST00000551769 560 ntTSL 312.25□□□□□ -0.453e-6■□□□□ 9.3
NCBP2P52298 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.463e-6■□□□□ 9.3
NCBP2P52298 RHPN2-204ENST00000588388 2378 ntTSL 212.1□□□□□ -0.473e-6■□□□□ 9.3
NCBP2P52298 MRPS27-204ENST00000508863 956 ntTSL 312.03□□□□□ -0.483e-6■□□□□ 9.3
NCBP2P52298 COG2-203ENST00000468893 2784 ntTSL 211.68□□□□□ -0.543e-6■□□□□ 9.3
NCBP2P52298 MRPS27-213ENST00000522404 550 ntTSL 411.57□□□□□ -0.563e-6■□□□□ 9.3
NCBP2P52298 OIP5-AS1-204ENST00000558457 676 ntTSL 211.54□□□□□ -0.565e-19■□□□□ 9.3
NCBP2P52298 CDC23-209ENST00000511383 584 ntTSL 311.47□□□□□ -0.573e-6■□□□□ 9.3
NCBP2P52298 MRPS27-212ENST00000522095 504 ntTSL 2 BASIC11.44□□□□□ -0.583e-6■□□□□ 9.3
NCBP2P52298 COQ5-202ENST00000445328 992 ntTSL 2 BASIC11.2□□□□□ -0.623e-6■□□□□ 9.3
NCBP2P52298 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.623e-6■□□□□ 9.3
NCBP2P52298 AL359736.1-201ENST00000382141 4157 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.653e-6■□□□□ 9.3
NCBP2P52298 COQ5-206ENST00000547943 552 ntTSL 310.93□□□□□ -0.663e-6■□□□□ 9.3
NCBP2P52298 COQ5-208ENST00000552443 972 ntTSL 210.93□□□□□ -0.663e-6■□□□□ 9.3
NCBP2P52298 COG2-202ENST00000366669 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.673e-6■□□□□ 9.3
NCBP2P52298 ANKRD13C-201ENST00000262346 3327 ntTSL 1 (best) BASIC10.51□□□□□ -0.733e-6■□□□□ 9.3
NCBP2P52298 MRPS27-205ENST00000513900 1369 ntTSL 2 BASIC10.12□□□□□ -0.793e-6■□□□□ 9.3
NCBP2P52298 OIP5-AS1-207ENST00000560545 566 ntTSL 29.75□□□□□ -0.855e-19■□□□□ 9.3
NCBP2P52298 ERI2-207ENST00000563537 230 ntTSL 59.66□□□□□ -0.863e-6■□□□□ 9.3
NCBP2P52298 CCDC58-205ENST00000479899 545 ntTSL 3 BASIC9.59□□□□□ -0.873e-6■□□□□ 9.3
NCBP2P52298 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.913e-6■□□□□ 9.3
Retrieved 100 of 18,329 protein–RNA pairs in 442.5 ms