Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SIGLEC30P-201ENST00000455569 941 ntBASIC18.46■□□□□ 0.55
PDE6CP51160 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDE6CP51160 SART3-203ENST00000546611 1184 ntBASIC18.46■□□□□ 0.55
PDE6CP51160 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.46■□□□□ 0.55
PDE6CP51160 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.46■□□□□ 0.55
PDE6CP51160 NKILA-202ENST00000614771 2598 ntBASIC18.46■□□□□ 0.55
PDE6CP51160 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6CP51160 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDE6CP51160 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDE6CP51160 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDE6CP51160 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDE6CP51160 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.45■□□□□ 0.54
PDE6CP51160 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.45■□□□□ 0.54
PDE6CP51160 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.45■□□□□ 0.54
PDE6CP51160 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.45■□□□□ 0.54
PDE6CP51160 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDE6CP51160 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.45■□□□□ 0.54
PDE6CP51160 OR7E14P-202ENST00000530490 1290 ntBASIC18.45■□□□□ 0.54
PDE6CP51160 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.45■□□□□ 0.54
PDE6CP51160 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.45■□□□□ 0.54
PDE6CP51160 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PDE6CP51160 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.45■□□□□ 0.54
PDE6CP51160 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
PDE6CP51160 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.45■□□□□ 0.54
PDE6CP51160 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6CP51160 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6CP51160 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PDE6CP51160 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PDE6CP51160 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
PDE6CP51160 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PDE6CP51160 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6CP51160 AC011676.5-201ENST00000624864 2660 ntBASIC18.44■□□□□ 0.54
PDE6CP51160 SIGLEC16-201ENST00000599858 1437 ntBASIC18.44■□□□□ 0.54
PDE6CP51160 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDE6CP51160 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 AC124947.2-201ENST00000547118 1133 ntBASIC18.44■□□□□ 0.54
PDE6CP51160 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6CP51160 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6CP51160 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDE6CP51160 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.44■□□□□ 0.54
PDE6CP51160 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6CP51160 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6CP51160 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6CP51160 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.43■□□□□ 0.54
PDE6CP51160 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6CP51160 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6CP51160 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6CP51160 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PDE6CP51160 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDE6CP51160 AC079776.2-201ENST00000641154 1609 ntBASIC18.43■□□□□ 0.54
PDE6CP51160 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.43■□□□□ 0.54
PDE6CP51160 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDE6CP51160 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PDE6CP51160 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.43■□□□□ 0.54
PDE6CP51160 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDE6CP51160 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.43■□□□□ 0.54
PDE6CP51160 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms