Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.64■□□□□ 0.25
CSNK1EP49674 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CSNK1EP49674 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1EP49674 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1EP49674 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1EP49674 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
CSNK1EP49674 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
CSNK1EP49674 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CSNK1EP49674 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1EP49674 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CSNK1EP49674 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1EP49674 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1EP49674 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1EP49674 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1EP49674 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1EP49674 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1EP49674 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1EP49674 MIR661-201ENST00000384842 89 ntBASIC16.63■□□□□ 0.25
CSNK1EP49674 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1EP49674 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1EP49674 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1EP49674 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1EP49674 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.63■□□□□ 0.25
CSNK1EP49674 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1EP49674 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.63■□□□□ 0.25
CSNK1EP49674 AC084121.4-201ENST00000641598 221 ntBASIC16.63■□□□□ 0.25
CSNK1EP49674 AF228730.8-201ENST00000642140 221 ntBASIC16.63■□□□□ 0.25
CSNK1EP49674 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1EP49674 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1EP49674 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1EP49674 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1EP49674 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CSNK1EP49674 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1EP49674 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1EP49674 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1EP49674 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1EP49674 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1EP49674 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CSNK1EP49674 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1EP49674 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1EP49674 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1EP49674 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1EP49674 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1EP49674 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1EP49674 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1EP49674 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1EP49674 HCG4-201ENST00000418983 998 ntBASIC16.62■□□□□ 0.25
CSNK1EP49674 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1EP49674 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1EP49674 AL512638.1-201ENST00000457493 794 ntBASIC16.62■□□□□ 0.25
CSNK1EP49674 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.62■□□□□ 0.25
CSNK1EP49674 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.62■□□□□ 0.25
CSNK1EP49674 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1EP49674 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.62■□□□□ 0.25
CSNK1EP49674 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.62■□□□□ 0.25
CSNK1EP49674 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.62■□□□□ 0.25
CSNK1EP49674 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.62■□□□□ 0.25
CSNK1EP49674 MIR6080-201ENST00000617359 66 ntBASIC16.62■□□□□ 0.25
CSNK1EP49674 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CSNK1EP49674 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1EP49674 GNAS-203ENST00000306120 1878 ntBASIC16.62■□□□□ 0.25
CSNK1EP49674 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1EP49674 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 AC133963.1-201ENST00000504166 1679 ntBASIC16.62■□□□□ 0.25
CSNK1EP49674 SLC22A20-204ENST00000530038 1673 ntBASIC16.62■□□□□ 0.25
CSNK1EP49674 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.62■□□□□ 0.25
CSNK1EP49674 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1EP49674 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CSNK1EP49674 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1EP49674 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CSNK1EP49674 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1EP49674 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CSNK1EP49674 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1EP49674 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms