Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 HMGA1P7-201ENST00000406908 502 ntBASIC17.03■□□□□ 0.32
CSNK1DP48730 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1DP48730 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1DP48730 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.03■□□□□ 0.32
CSNK1DP48730 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1DP48730 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
CSNK1DP48730 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.03■□□□□ 0.32
CSNK1DP48730 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.03■□□□□ 0.32
CSNK1DP48730 AL139011.1-202ENST00000642063 584 ntBASIC17.03■□□□□ 0.32
CSNK1DP48730 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1DP48730 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1DP48730 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1DP48730 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.03■□□□□ 0.32
CSNK1DP48730 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CSNK1DP48730 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1DP48730 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1DP48730 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1DP48730 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1DP48730 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.03■□□□□ 0.32
CSNK1DP48730 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSNK1DP48730 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.02■□□□□ 0.32
CSNK1DP48730 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSNK1DP48730 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1DP48730 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1DP48730 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1DP48730 PCDHB17P-201ENST00000539533 2393 ntBASIC17.02■□□□□ 0.32
CSNK1DP48730 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSNK1DP48730 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1DP48730 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.02■□□□□ 0.32
CSNK1DP48730 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1DP48730 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CSNK1DP48730 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CSNK1DP48730 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1DP48730 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1DP48730 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1DP48730 YBX2P1-201ENST00000394192 760 ntBASIC17.02■□□□□ 0.32
CSNK1DP48730 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1DP48730 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CSNK1DP48730 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
CSNK1DP48730 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.02■□□□□ 0.32
CSNK1DP48730 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.02■□□□□ 0.32
CSNK1DP48730 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.02■□□□□ 0.32
CSNK1DP48730 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1DP48730 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CSNK1DP48730 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CSNK1DP48730 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSNK1DP48730 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CSNK1DP48730 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1DP48730 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1DP48730 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1DP48730 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1DP48730 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1DP48730 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CSNK1DP48730 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.02■□□□□ 0.31
CSNK1DP48730 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1DP48730 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSNK1DP48730 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CSNK1DP48730 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CSNK1DP48730 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.01■□□□□ 0.31
CSNK1DP48730 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1DP48730 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CSNK1DP48730 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 DNAJB3-201ENST00000446806 729 ntBASIC17.01■□□□□ 0.31
CSNK1DP48730 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.01■□□□□ 0.31
CSNK1DP48730 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.01■□□□□ 0.31
CSNK1DP48730 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.01■□□□□ 0.31
CSNK1DP48730 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 MIR3909-201ENST00000579518 119 ntBASIC17.01■□□□□ 0.31
CSNK1DP48730 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 CYP2A7P1-201ENST00000595391 815 ntBASIC17.01■□□□□ 0.31
CSNK1DP48730 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.01■□□□□ 0.31
CSNK1DP48730 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.01■□□□□ 0.31
CSNK1DP48730 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CSNK1DP48730 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
CSNK1DP48730 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CSNK1DP48730 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSNK1DP48730 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CSNK1DP48730 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1DP48730 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17■□□□□ 0.31
CSNK1DP48730 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1DP48730 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSNK1DP48730 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1DP48730 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1DP48730 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms