Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
TNFSF9P41273 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.39■□□□□ 0.53
TNFSF9P41273 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.39■□□□□ 0.53
TNFSF9P41273 PDPK2P-202ENST00000562415 1191 ntBASIC18.39■□□□□ 0.53
TNFSF9P41273 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TNFSF9P41273 AC010327.4-202ENST00000591484 748 ntBASIC18.39■□□□□ 0.53
TNFSF9P41273 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.39■□□□□ 0.53
TNFSF9P41273 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.39■□□□□ 0.53
TNFSF9P41273 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TNFSF9P41273 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.39■□□□□ 0.53
TNFSF9P41273 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 PCDHB17P-201ENST00000539533 2393 ntBASIC18.39■□□□□ 0.53
TNFSF9P41273 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TNFSF9P41273 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TNFSF9P41273 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNFSF9P41273 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.39■□□□□ 0.53
TNFSF9P41273 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TNFSF9P41273 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFSF9P41273 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.38■□□□□ 0.53
TNFSF9P41273 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFSF9P41273 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.38■□□□□ 0.53
TNFSF9P41273 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.38■□□□□ 0.53
TNFSF9P41273 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFSF9P41273 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.38■□□□□ 0.53
TNFSF9P41273 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.38■□□□□ 0.53
TNFSF9P41273 AC007064.4-201ENST00000637740 555 ntBASIC18.38■□□□□ 0.53
TNFSF9P41273 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TNFSF9P41273 KRT8P49-201ENST00000604166 1432 ntBASIC18.38■□□□□ 0.53
TNFSF9P41273 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFSF9P41273 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 AC092919.2-201ENST00000623631 1645 ntBASIC18.38■□□□□ 0.53
TNFSF9P41273 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFSF9P41273 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFSF9P41273 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFSF9P41273 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFSF9P41273 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.37■□□□□ 0.53
TNFSF9P41273 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TNFSF9P41273 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.37■□□□□ 0.53
TNFSF9P41273 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.37■□□□□ 0.53
TNFSF9P41273 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFSF9P41273 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFSF9P41273 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFSF9P41273 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.37■□□□□ 0.53
TNFSF9P41273 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TNFSF9P41273 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
TNFSF9P41273 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TNFSF9P41273 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFSF9P41273 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFSF9P41273 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
TNFSF9P41273 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFSF9P41273 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TNFSF9P41273 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFSF9P41273 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFSF9P41273 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms