Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.94■□□□□ 0.46
GRIK1P39086 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
GRIK1P39086 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.94■□□□□ 0.46
GRIK1P39086 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.94■□□□□ 0.46
GRIK1P39086 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.94■□□□□ 0.46
GRIK1P39086 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.94■□□□□ 0.46
GRIK1P39086 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.94■□□□□ 0.46
GRIK1P39086 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.94■□□□□ 0.46
GRIK1P39086 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
GRIK1P39086 AC107918.2-201ENST00000530817 355 ntBASIC17.94■□□□□ 0.46
GRIK1P39086 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
GRIK1P39086 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.94■□□□□ 0.46
GRIK1P39086 AL691403.2-201ENST00000618460 490 ntBASIC17.94■□□□□ 0.46
GRIK1P39086 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.94■□□□□ 0.46
GRIK1P39086 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.94■□□□□ 0.46
GRIK1P39086 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.94■□□□□ 0.46
GRIK1P39086 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
GRIK1P39086 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.94■□□□□ 0.46
GRIK1P39086 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
GRIK1P39086 AC141586.5-201ENST00000624546 2050 ntBASIC17.94■□□□□ 0.46
GRIK1P39086 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.93■□□□□ 0.46
GRIK1P39086 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.93■□□□□ 0.46
GRIK1P39086 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GRIK1P39086 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.93■□□□□ 0.46
GRIK1P39086 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.93■□□□□ 0.46
GRIK1P39086 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.93■□□□□ 0.46
GRIK1P39086 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
GRIK1P39086 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.93■□□□□ 0.46
GRIK1P39086 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GRIK1P39086 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.93■□□□□ 0.46
GRIK1P39086 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.93■□□□□ 0.46
GRIK1P39086 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.93■□□□□ 0.46
GRIK1P39086 REXO1L3P-201ENST00000622202 1288 ntBASIC17.93■□□□□ 0.46
GRIK1P39086 C20orf181-201ENST00000623918 480 ntBASIC17.93■□□□□ 0.46
GRIK1P39086 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
GRIK1P39086 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GRIK1P39086 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GRIK1P39086 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
GRIK1P39086 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.93■□□□□ 0.46
GRIK1P39086 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GRIK1P39086 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.92■□□□□ 0.46
GRIK1P39086 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GRIK1P39086 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
GRIK1P39086 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.92■□□□□ 0.46
GRIK1P39086 ALG1L5P-201ENST00000482043 771 ntBASIC17.92■□□□□ 0.46
GRIK1P39086 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.92■□□□□ 0.46
GRIK1P39086 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.92■□□□□ 0.46
GRIK1P39086 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
GRIK1P39086 AL078644.1-201ENST00000609881 752 ntBASIC17.92■□□□□ 0.46
GRIK1P39086 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GRIK1P39086 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GRIK1P39086 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GRIK1P39086 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GRIK1P39086 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GRIK1P39086 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GRIK1P39086 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
GRIK1P39086 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GRIK1P39086 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GRIK1P39086 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GRIK1P39086 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GRIK1P39086 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GRIK1P39086 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.91■□□□□ 0.46
GRIK1P39086 RPS8P6-201ENST00000426177 609 ntBASIC17.91■□□□□ 0.46
GRIK1P39086 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.91■□□□□ 0.46
GRIK1P39086 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GRIK1P39086 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms