Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.54■■□□□ 1.04
ATP6V1AP38606 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.54■■□□□ 1.04
ATP6V1AP38606 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 SPTLC1P1-201ENST00000447199 261 ntBASIC21.54■■□□□ 1.04
ATP6V1AP38606 AC105233.2-201ENST00000523697 349 ntBASIC21.54■■□□□ 1.04
ATP6V1AP38606 AF228730.5-201ENST00000530288 346 ntBASIC21.54■■□□□ 1.04
ATP6V1AP38606 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.54■■□□□ 1.04
ATP6V1AP38606 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6V1AP38606 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6V1AP38606 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6V1AP38606 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ATP6V1AP38606 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6V1AP38606 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V1AP38606 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6V1AP38606 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 AL359881.2-201ENST00000602973 570 ntBASIC21.53■■□□□ 1.04
ATP6V1AP38606 AC007967.4-201ENST00000614700 386 ntBASIC21.53■■□□□ 1.04
ATP6V1AP38606 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP6V1AP38606 AC133963.1-201ENST00000504166 1679 ntBASIC21.53■■□□□ 1.04
ATP6V1AP38606 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V1AP38606 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.52■■□□□ 1.04
ATP6V1AP38606 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
ATP6V1AP38606 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V1AP38606 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
ATP6V1AP38606 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
ATP6V1AP38606 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP6V1AP38606 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V1AP38606 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V1AP38606 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms