Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SLC6A4P31645 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC6A4P31645 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A4P31645 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC6A4P31645 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A4P31645 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A4P31645 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC6A4P31645 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC6A4P31645 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC6A4P31645 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC6A4P31645 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 AC060834.1-201ENST00000443027 2032 ntBASIC17.44■□□□□ 0.38
SLC6A4P31645 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SLC6A4P31645 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC6A4P31645 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC6A4P31645 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC6A4P31645 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SLC6A4P31645 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A4P31645 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A4P31645 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SLC6A4P31645 AC005412.3-201ENST00000580309 715 ntBASIC17.44■□□□□ 0.38
SLC6A4P31645 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC6A4P31645 AC068137.2-201ENST00000605408 478 ntBASIC17.44■□□□□ 0.38
SLC6A4P31645 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A4P31645 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A4P31645 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC6A4P31645 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SLC6A4P31645 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC6A4P31645 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A4P31645 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC6A4P31645 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC6A4P31645 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC6A4P31645 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.43■□□□□ 0.38
SLC6A4P31645 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 AC005829.1-201ENST00000570002 483 ntBASIC17.43■□□□□ 0.38
SLC6A4P31645 AP002472.1-201ENST00000577490 586 ntBASIC17.43■□□□□ 0.38
SLC6A4P31645 MIR4515-201ENST00000584082 81 ntBASIC17.43■□□□□ 0.38
SLC6A4P31645 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC6A4P31645 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC6A4P31645 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 KRT8P49-201ENST00000604166 1432 ntBASIC17.43■□□□□ 0.38
SLC6A4P31645 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SLC6A4P31645 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC6A4P31645 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC6A4P31645 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC6A4P31645 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 AL353732.1-201ENST00000569618 1459 ntBASIC17.43■□□□□ 0.38
SLC6A4P31645 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLC6A4P31645 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A4P31645 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC6A4P31645 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC6A4P31645 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC6A4P31645 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLC6A4P31645 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A4P31645 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC6A4P31645 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A4P31645 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A4P31645 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC6A4P31645 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A4P31645 HMGA1P7-201ENST00000406908 502 ntBASIC17.42■□□□□ 0.38
SLC6A4P31645 HTR5BP-201ENST00000430851 1154 ntBASIC17.42■□□□□ 0.38
SLC6A4P31645 FAM58CP-201ENST00000435741 640 ntBASIC17.42■□□□□ 0.38
SLC6A4P31645 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms