Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF1P30408 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
TM4SF1P30408 FAM220BP-201ENST00000377689 816 ntBASIC20.95■□□□□ 0.94
TM4SF1P30408 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TM4SF1P30408 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TM4SF1P30408 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
TM4SF1P30408 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.95■□□□□ 0.94
TM4SF1P30408 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TM4SF1P30408 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.95■□□□□ 0.94
TM4SF1P30408 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.95■□□□□ 0.94
TM4SF1P30408 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TM4SF1P30408 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.95■□□□□ 0.94
TM4SF1P30408 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF1P30408 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.95■□□□□ 0.94
TM4SF1P30408 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF1P30408 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF1P30408 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF1P30408 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.94■□□□□ 0.94
TM4SF1P30408 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.94■□□□□ 0.94
TM4SF1P30408 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF1P30408 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TM4SF1P30408 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF1P30408 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF1P30408 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF1P30408 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.94■□□□□ 0.94
TM4SF1P30408 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.94■□□□□ 0.94
TM4SF1P30408 GIMAP3P-201ENST00000495150 836 ntBASIC20.94■□□□□ 0.94
TM4SF1P30408 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
TM4SF1P30408 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.94■□□□□ 0.94
TM4SF1P30408 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.94■□□□□ 0.94
TM4SF1P30408 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF1P30408 AL133215.2-201ENST00000609242 977 ntBASIC20.94■□□□□ 0.94
TM4SF1P30408 MIR6799-201ENST00000620297 69 ntBASIC20.94■□□□□ 0.94
TM4SF1P30408 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.94■□□□□ 0.94
TM4SF1P30408 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF1P30408 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF1P30408 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TM4SF1P30408 KRT8P49-201ENST00000604166 1432 ntBASIC20.94■□□□□ 0.94
TM4SF1P30408 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TM4SF1P30408 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.93■□□□□ 0.94
TM4SF1P30408 CETN4P-206ENST00000642099 2168 ntBASIC20.93■□□□□ 0.94
TM4SF1P30408 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TM4SF1P30408 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 AC079776.1-201ENST00000401540 1152 ntBASIC20.93■□□□□ 0.94
TM4SF1P30408 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.93■□□□□ 0.94
TM4SF1P30408 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.93■□□□□ 0.94
TM4SF1P30408 GNAQP1-201ENST00000444815 1067 ntBASIC20.93■□□□□ 0.94
TM4SF1P30408 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.93■□□□□ 0.94
TM4SF1P30408 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.93■□□□□ 0.94
TM4SF1P30408 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TM4SF1P30408 AC104794.3-201ENST00000566840 1248 ntBASIC20.93■□□□□ 0.94
TM4SF1P30408 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.93■□□□□ 0.94
TM4SF1P30408 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.93■□□□□ 0.94
TM4SF1P30408 AL589739.1-201ENST00000607720 493 ntBASIC20.93■□□□□ 0.94
TM4SF1P30408 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TM4SF1P30408 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.93■□□□□ 0.94
TM4SF1P30408 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.93■□□□□ 0.94
TM4SF1P30408 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.93■□□□□ 0.94
TM4SF1P30408 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TM4SF1P30408 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.93■□□□□ 0.94
TM4SF1P30408 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF1P30408 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.92■□□□□ 0.94
TM4SF1P30408 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.92■□□□□ 0.94
TM4SF1P30408 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 AC135050.7-201ENST00000624508 2218 ntBASIC20.92■□□□□ 0.94
TM4SF1P30408 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.92■□□□□ 0.94
TM4SF1P30408 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.92■□□□□ 0.94
TM4SF1P30408 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.92■□□□□ 0.94
TM4SF1P30408 PRYP6-201ENST00000514804 343 ntBASIC20.92■□□□□ 0.94
TM4SF1P30408 ZNF890P-202ENST00000530367 1156 ntBASIC20.92■□□□□ 0.94
TM4SF1P30408 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.92■□□□□ 0.94
TM4SF1P30408 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.92■□□□□ 0.94
TM4SF1P30408 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms