Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VARSP26640 AC046185.3-201ENST00000623228 1824 ntBASIC16.83■□□□□ 0.28
VARSP26640 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
VARSP26640 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VARSP26640 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VARSP26640 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.82■□□□□ 0.28
VARSP26640 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VARSP26640 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.82■□□□□ 0.28
VARSP26640 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.82■□□□□ 0.28
VARSP26640 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
VARSP26640 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.82■□□□□ 0.28
VARSP26640 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.82■□□□□ 0.28
VARSP26640 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.82■□□□□ 0.28
VARSP26640 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.82■□□□□ 0.28
VARSP26640 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
VARSP26640 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.82■□□□□ 0.28
VARSP26640 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.82■□□□□ 0.28
VARSP26640 AC073592.5-201ENST00000624854 528 ntBASIC16.82■□□□□ 0.28
VARSP26640 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VARSP26640 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
VARSP26640 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VARSP26640 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.82■□□□□ 0.28
VARSP26640 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
VARSP26640 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VARSP26640 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
VARSP26640 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.81■□□□□ 0.28
VARSP26640 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.81■□□□□ 0.28
VARSP26640 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VARSP26640 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
VARSP26640 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VARSP26640 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.81■□□□□ 0.28
VARSP26640 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.81■□□□□ 0.28
VARSP26640 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.81■□□□□ 0.28
VARSP26640 AL590627.1-203ENST00000421194 1026 ntBASIC16.81■□□□□ 0.28
VARSP26640 AC093909.1-201ENST00000504731 1122 ntBASIC16.81■□□□□ 0.28
VARSP26640 AC120114.3-201ENST00000611923 658 ntBASIC16.81■□□□□ 0.28
VARSP26640 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VARSP26640 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.81■□□□□ 0.28
VARSP26640 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 AC116353.5-201ENST00000638148 1699 ntBASIC16.81■□□□□ 0.28
VARSP26640 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 PCDHA1-201ENST00000378133 2726 ntBASIC16.81■□□□□ 0.28
VARSP26640 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
VARSP26640 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARSP26640 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.81■□□□□ 0.28
VARSP26640 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.81■□□□□ 0.28
VARSP26640 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VARSP26640 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.8■□□□□ 0.28
VARSP26640 AC060834.1-201ENST00000443027 2032 ntBASIC16.8■□□□□ 0.28
VARSP26640 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.8■□□□□ 0.28
VARSP26640 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms