Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHMLP26374 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
CHMLP26374 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMLP26374 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CHMLP26374 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHMLP26374 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.53■□□□□ 0.88
CHMLP26374 AL121912.1-201ENST00000603683 238 ntBASIC20.53■□□□□ 0.88
CHMLP26374 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHMLP26374 AC002310.6-201ENST00000624451 1377 ntBASIC20.53■□□□□ 0.88
CHMLP26374 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMLP26374 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHMLP26374 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CHMLP26374 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMLP26374 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CHMLP26374 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMLP26374 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHMLP26374 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CHMLP26374 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.53■□□□□ 0.88
CHMLP26374 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMLP26374 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMLP26374 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMLP26374 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMLP26374 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.52■□□□□ 0.88
CHMLP26374 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CHMLP26374 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMLP26374 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMLP26374 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMLP26374 AC018712.1-201ENST00000455767 687 ntBASIC20.52■□□□□ 0.88
CHMLP26374 SLC25A6P2-201ENST00000497974 877 ntBASIC20.52■□□□□ 0.88
CHMLP26374 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CHMLP26374 OR7E14P-202ENST00000530490 1290 ntBASIC20.52■□□□□ 0.88
CHMLP26374 AC006557.2-201ENST00000592985 1240 ntBASIC20.52■□□□□ 0.88
CHMLP26374 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.52■□□□□ 0.88
CHMLP26374 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.52■□□□□ 0.88
CHMLP26374 REXO1L3P-201ENST00000622202 1288 ntBASIC20.52■□□□□ 0.88
CHMLP26374 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.52■□□□□ 0.88
CHMLP26374 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMLP26374 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMLP26374 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMLP26374 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMLP26374 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.52■□□□□ 0.87
CHMLP26374 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHMLP26374 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHMLP26374 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMLP26374 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CHMLP26374 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.52■□□□□ 0.87
CHMLP26374 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHMLP26374 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHMLP26374 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 PI4KAP1-204ENST00000612579 1703 ntBASIC20.51■□□□□ 0.87
CHMLP26374 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMLP26374 AC079781.3-201ENST00000449110 356 ntBASIC20.51■□□□□ 0.87
CHMLP26374 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.51■□□□□ 0.87
CHMLP26374 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 AC148477.8-201ENST00000624298 468 ntBASIC20.51■□□□□ 0.87
CHMLP26374 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMLP26374 AF228730.7-201ENST00000641842 219 ntBASIC20.51■□□□□ 0.87
CHMLP26374 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMLP26374 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMLP26374 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMLP26374 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHMLP26374 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMLP26374 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMLP26374 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMLP26374 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMLP26374 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CHMLP26374 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMLP26374 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMLP26374 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CHMLP26374 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMLP26374 TOP3BP1-201ENST00000420768 1380 ntBASIC20.5■□□□□ 0.87
CHMLP26374 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMLP26374 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMLP26374 AC006277.1-201ENST00000624348 1610 ntBASIC20.5■□□□□ 0.87
CHMLP26374 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMLP26374 FAM197Y8-203ENST00000450145 560 ntBASIC20.5■□□□□ 0.87
CHMLP26374 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMLP26374 AC073648.2-201ENST00000510116 352 ntBASIC20.5■□□□□ 0.87
CHMLP26374 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMLP26374 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMLP26374 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.5■□□□□ 0.87
CHMLP26374 AC012640.2-201ENST00000561606 901 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms