Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.88■□□□□ 0.13
TNFRSF1BP20333 AC073592.5-201ENST00000624854 528 ntBASIC15.88■□□□□ 0.13
TNFRSF1BP20333 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 ALOX12P2-203ENST00000570921 1945 ntBASIC15.88■□□□□ 0.13
TNFRSF1BP20333 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 AL391256.1-201ENST00000443260 1855 ntBASIC15.87■□□□□ 0.13
TNFRSF1BP20333 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 AL136038.3-201ENST00000561909 1096 ntBASIC15.87■□□□□ 0.13
TNFRSF1BP20333 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 AD001527.2-201ENST00000622994 785 ntBASIC15.87■□□□□ 0.13
TNFRSF1BP20333 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFRSF1BP20333 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 AC003669.1-201ENST00000334569 611 ntBASIC15.86■□□□□ 0.13
TNFRSF1BP20333 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 AC009533.2-201ENST00000543664 586 ntBASIC15.86■□□□□ 0.13
TNFRSF1BP20333 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 NTF6B-201ENST00000591913 560 ntBASIC15.86■□□□□ 0.13
TNFRSF1BP20333 AC011467.2-201ENST00000598425 242 ntBASIC15.86■□□□□ 0.13
TNFRSF1BP20333 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.86■□□□□ 0.13
TNFRSF1BP20333 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms