Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PTPRAP18433 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPRAP18433 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPRAP18433 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PTPRAP18433 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPRAP18433 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPRAP18433 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPRAP18433 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPRAP18433 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPRAP18433 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPRAP18433 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.55■□□□□ 0.72
PTPRAP18433 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPRAP18433 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPRAP18433 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPRAP18433 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPRAP18433 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPRAP18433 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPRAP18433 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.55■□□□□ 0.72
PTPRAP18433 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PTPRAP18433 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPRAP18433 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PTPRAP18433 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPRAP18433 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPRAP18433 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPRAP18433 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.54■□□□□ 0.72
PTPRAP18433 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PTPRAP18433 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PTPRAP18433 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PTPRAP18433 AC003101.2-201ENST00000612557 442 ntBASIC19.54■□□□□ 0.72
PTPRAP18433 AC007967.4-201ENST00000614700 386 ntBASIC19.54■□□□□ 0.72
PTPRAP18433 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PTPRAP18433 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPRAP18433 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPRAP18433 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPRAP18433 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PTPRAP18433 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPRAP18433 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPRAP18433 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 GK-202ENST00000378941 458 ntTSL 3 BASIC19.53■□□□□ 0.72
PTPRAP18433 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPRAP18433 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 KRT18P34-201ENST00000488218 1270 ntBASIC19.53■□□□□ 0.72
PTPRAP18433 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.53■□□□□ 0.72
PTPRAP18433 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPRAP18433 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPRAP18433 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
PTPRAP18433 SPDYE12P-201ENST00000618416 771 ntBASIC19.53■□□□□ 0.72
PTPRAP18433 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
PTPRAP18433 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPRAP18433 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPRAP18433 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPRAP18433 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPRAP18433 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPRAP18433 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PTPRAP18433 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PTPRAP18433 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PTPRAP18433 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRAP18433 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPRAP18433 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPRAP18433 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRAP18433 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPRAP18433 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRAP18433 FOXO1B-201ENST00000504678 1527 ntBASIC19.52■□□□□ 0.72
PTPRAP18433 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRAP18433 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRAP18433 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRAP18433 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRAP18433 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPRAP18433 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRAP18433 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms