Protein–RNA interactions for Protein: P18085

ARF4, ADP-ribosylation factor 4, humanhuman

Predicted RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4P18085 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ARF4P18085 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.42■□□□□ 0.54
ARF4P18085 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ARF4P18085 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ARF4P18085 AC005332.8-201ENST00000622750 2735 ntBASIC18.42■□□□□ 0.54
ARF4P18085 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.42■□□□□ 0.54
ARF4P18085 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.42■□□□□ 0.54
ARF4P18085 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.42■□□□□ 0.54
ARF4P18085 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ARF4P18085 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.42■□□□□ 0.54
ARF4P18085 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.42■□□□□ 0.54
ARF4P18085 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ARF4P18085 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.42■□□□□ 0.54
ARF4P18085 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.42■□□□□ 0.54
ARF4P18085 AC105339.1-204ENST00000636249 355 ntBASIC18.42■□□□□ 0.54
ARF4P18085 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.42■□□□□ 0.54
ARF4P18085 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 AC131009.4-201ENST00000624048 1740 ntBASIC18.42■□□□□ 0.54
ARF4P18085 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ARF4P18085 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ARF4P18085 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARF4P18085 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.42■□□□□ 0.54
ARF4P18085 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ARF4P18085 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.42■□□□□ 0.54
ARF4P18085 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ARF4P18085 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ARF4P18085 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.41■□□□□ 0.54
ARF4P18085 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.41■□□□□ 0.54
ARF4P18085 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.41■□□□□ 0.54
ARF4P18085 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.41■□□□□ 0.54
ARF4P18085 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.41■□□□□ 0.54
ARF4P18085 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ARF4P18085 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.41■□□□□ 0.54
ARF4P18085 AL355306.1-201ENST00000415580 579 ntBASIC18.41■□□□□ 0.54
ARF4P18085 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.41■□□□□ 0.54
ARF4P18085 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.41■□□□□ 0.54
ARF4P18085 AL513210.1-201ENST00000629608 234 ntBASIC18.41■□□□□ 0.54
ARF4P18085 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.41■□□□□ 0.54
ARF4P18085 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 AL121761.2-201ENST00000598007 1648 ntBASIC18.41■□□□□ 0.54
ARF4P18085 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ARF4P18085 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.41■□□□□ 0.54
ARF4P18085 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
ARF4P18085 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARF4P18085 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 AC092068.3-201ENST00000587894 2016 ntBASIC18.4■□□□□ 0.54
ARF4P18085 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ARF4P18085 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ARF4P18085 AP000344.2-201ENST00000512987 629 ntBASIC18.4■□□□□ 0.54
ARF4P18085 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 AC087641.1-201ENST00000557561 1021 ntBASIC18.4■□□□□ 0.54
ARF4P18085 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.4■□□□□ 0.54
ARF4P18085 AL009183.1-201ENST00000603760 355 ntBASIC18.4■□□□□ 0.54
ARF4P18085 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.4■□□□□ 0.54
ARF4P18085 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.4■□□□□ 0.54
ARF4P18085 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ARF4P18085 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 HCG11-201ENST00000411553 5696 ntBASIC18.4■□□□□ 0.54
ARF4P18085 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARF4P18085 AC108860.2-201ENST00000562760 2183 ntBASIC18.4■□□□□ 0.54
ARF4P18085 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ARF4P18085 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ARF4P18085 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.39■□□□□ 0.53
ARF4P18085 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms