Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LAMP1P11279 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.18■□□□□ 0.18
LAMP1P11279 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
LAMP1P11279 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LAMP1P11279 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LAMP1P11279 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
LAMP1P11279 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LAMP1P11279 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LAMP1P11279 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LAMP1P11279 TUBB8P12-201ENST00000308911 1335 ntBASIC16.18■□□□□ 0.18
LAMP1P11279 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LAMP1P11279 TUBB7P-202ENST00000428444 1305 ntBASIC16.18■□□□□ 0.18
LAMP1P11279 TUBB8P7-204ENST00000567960 1332 ntBASIC16.18■□□□□ 0.18
LAMP1P11279 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.18■□□□□ 0.18
LAMP1P11279 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LAMP1P11279 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
LAMP1P11279 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.17■□□□□ 0.18
LAMP1P11279 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LAMP1P11279 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.17■□□□□ 0.18
LAMP1P11279 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.17■□□□□ 0.18
LAMP1P11279 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.17■□□□□ 0.18
LAMP1P11279 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.17■□□□□ 0.18
LAMP1P11279 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.17■□□□□ 0.18
LAMP1P11279 KRT16P4-201ENST00000453883 522 ntBASIC16.17■□□□□ 0.18
LAMP1P11279 AC132008.2-207ENST00000454517 770 ntBASIC16.17■□□□□ 0.18
LAMP1P11279 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.17■□□□□ 0.18
LAMP1P11279 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.17■□□□□ 0.18
LAMP1P11279 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.17■□□□□ 0.18
LAMP1P11279 AP001269.4-201ENST00000609611 512 ntBASIC16.17■□□□□ 0.18
LAMP1P11279 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LAMP1P11279 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.17■□□□□ 0.18
LAMP1P11279 AP005117.1-201ENST00000584346 1413 ntBASIC16.17■□□□□ 0.18
LAMP1P11279 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMP1P11279 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LAMP1P11279 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.16■□□□□ 0.18
LAMP1P11279 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.16■□□□□ 0.18
LAMP1P11279 CROCCP1-201ENST00000426910 5675 ntBASIC16.16■□□□□ 0.18
LAMP1P11279 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMP1P11279 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMP1P11279 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMP1P11279 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LAMP1P11279 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMP1P11279 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.16■□□□□ 0.18
LAMP1P11279 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LAMP1P11279 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMP1P11279 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.16■□□□□ 0.18
LAMP1P11279 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.16■□□□□ 0.18
LAMP1P11279 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
LAMP1P11279 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.16■□□□□ 0.18
LAMP1P11279 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
LAMP1P11279 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.16■□□□□ 0.18
LAMP1P11279 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMP1P11279 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMP1P11279 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LAMP1P11279 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LAMP1P11279 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LAMP1P11279 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.15■□□□□ 0.18
LAMP1P11279 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LAMP1P11279 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMP1P11279 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms