Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.34□□□□□ -0.27
CD28P10747 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CD28P10747 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.34□□□□□ -0.27
CD28P10747 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 PAWRP1-201ENST00000451083 565 ntBASIC13.34□□□□□ -0.27
CD28P10747 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 SLC25A6P2-201ENST00000497974 877 ntBASIC13.34□□□□□ -0.27
CD28P10747 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CD28P10747 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.34□□□□□ -0.27
CD28P10747 AC068137.2-201ENST00000605408 478 ntBASIC13.34□□□□□ -0.27
CD28P10747 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CD28P10747 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.34□□□□□ -0.27
CD28P10747 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CD28P10747 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.34□□□□□ -0.27
CD28P10747 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD28P10747 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.34□□□□□ -0.27
CD28P10747 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CD28P10747 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD28P10747 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.33□□□□□ -0.27
CD28P10747 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD28P10747 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CD28P10747 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.33□□□□□ -0.28
CD28P10747 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CD28P10747 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CD28P10747 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.33□□□□□ -0.28
CD28P10747 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CD28P10747 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.33□□□□□ -0.28
CD28P10747 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.33□□□□□ -0.28
CD28P10747 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.33□□□□□ -0.28
CD28P10747 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.33□□□□□ -0.28
CD28P10747 AC087163.2-201ENST00000457299 853 ntBASIC13.33□□□□□ -0.28
CD28P10747 AP002472.1-201ENST00000577490 586 ntBASIC13.33□□□□□ -0.28
CD28P10747 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.33□□□□□ -0.28
CD28P10747 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.33□□□□□ -0.28
CD28P10747 ACTL9-202ENST00000612068 1252 ntBASIC13.33□□□□□ -0.28
CD28P10747 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CD28P10747 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.33□□□□□ -0.28
CD28P10747 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.33□□□□□ -0.28
CD28P10747 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CD28P10747 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CD28P10747 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CD28P10747 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CD28P10747 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD28P10747 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.33□□□□□ -0.28
CD28P10747 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CD28P10747 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD28P10747 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms