Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AC079776.2-201ENST00000641154 1609 ntBASIC18.2■□□□□ 0.5
FAM228BP0C875 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FAM228BP0C875 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.19■□□□□ 0.5
FAM228BP0C875 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FAM228BP0C875 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.19■□□□□ 0.5
FAM228BP0C875 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
FAM228BP0C875 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.19■□□□□ 0.5
FAM228BP0C875 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
FAM228BP0C875 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.19■□□□□ 0.5
FAM228BP0C875 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.19■□□□□ 0.5
FAM228BP0C875 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.19■□□□□ 0.5
FAM228BP0C875 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.19■□□□□ 0.5
FAM228BP0C875 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.19■□□□□ 0.5
FAM228BP0C875 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.19■□□□□ 0.5
FAM228BP0C875 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.19■□□□□ 0.5
FAM228BP0C875 AC012615.1-201ENST00000565797 1299 ntBASIC18.19■□□□□ 0.5
FAM228BP0C875 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.19■□□□□ 0.5
FAM228BP0C875 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.19■□□□□ 0.5
FAM228BP0C875 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.19■□□□□ 0.5
FAM228BP0C875 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 MIR5100-201ENST00000579544 119 ntBASIC18.19■□□□□ 0.5
FAM228BP0C875 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
FAM228BP0C875 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.19■□□□□ 0.5
FAM228BP0C875 AC099336.1-202ENST00000602961 463 ntBASIC18.19■□□□□ 0.5
FAM228BP0C875 AL590326.2-201ENST00000625139 305 ntBASIC18.19■□□□□ 0.5
FAM228BP0C875 AP000550.4-202ENST00000639755 178 ntBASIC18.19■□□□□ 0.5
FAM228BP0C875 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FAM228BP0C875 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.19■□□□□ 0.5
FAM228BP0C875 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.19■□□□□ 0.5
FAM228BP0C875 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM228BP0C875 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FAM228BP0C875 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FAM228BP0C875 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FAM228BP0C875 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.18■□□□□ 0.5
FAM228BP0C875 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
FAM228BP0C875 CYP2T1P-202ENST00000641596 2535 ntBASIC18.18■□□□□ 0.5
FAM228BP0C875 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
FAM228BP0C875 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.18■□□□□ 0.5
FAM228BP0C875 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.18■□□□□ 0.5
FAM228BP0C875 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
FAM228BP0C875 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.18■□□□□ 0.5
FAM228BP0C875 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.18■□□□□ 0.5
FAM228BP0C875 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.18■□□□□ 0.5
FAM228BP0C875 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 AL358472.4-201ENST00000633140 710 ntBASIC18.18■□□□□ 0.5
FAM228BP0C875 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM228BP0C875 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
FAM228BP0C875 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.18■□□□□ 0.5
FAM228BP0C875 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.17■□□□□ 0.5
FAM228BP0C875 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
FAM228BP0C875 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM228BP0C875 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.17■□□□□ 0.5
FAM228BP0C875 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM228BP0C875 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
FAM228BP0C875 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.17■□□□□ 0.5
FAM228BP0C875 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
FAM228BP0C875 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.17■□□□□ 0.5
FAM228BP0C875 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.17■□□□□ 0.5
FAM228BP0C875 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
FAM228BP0C875 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms