Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
CD48P09326 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.66■□□□□ 0.42
CD48P09326 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.66■□□□□ 0.42
CD48P09326 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.66■□□□□ 0.42
CD48P09326 AC139887.3-201ENST00000568585 713 ntBASIC17.66■□□□□ 0.42
CD48P09326 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 LINC01711-201ENST00000598340 967 ntBASIC17.66■□□□□ 0.42
CD48P09326 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CD48P09326 TP73-AS1-207ENST00000624167 988 ntBASIC17.66■□□□□ 0.42
CD48P09326 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CD48P09326 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CD48P09326 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.66■□□□□ 0.42
CD48P09326 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD48P09326 AC006504.4-201ENST00000592118 1568 ntBASIC17.66■□□□□ 0.42
CD48P09326 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.66■□□□□ 0.42
CD48P09326 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CD48P09326 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CD48P09326 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.65■□□□□ 0.42
CD48P09326 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.65■□□□□ 0.42
CD48P09326 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.65■□□□□ 0.42
CD48P09326 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
CD48P09326 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.65■□□□□ 0.42
CD48P09326 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.65■□□□□ 0.42
CD48P09326 SCARNA2-201ENST00000458748 420 ntBASIC17.65■□□□□ 0.42
CD48P09326 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.65■□□□□ 0.42
CD48P09326 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.65■□□□□ 0.42
CD48P09326 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.65■□□□□ 0.42
CD48P09326 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.65■□□□□ 0.42
CD48P09326 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.65■□□□□ 0.42
CD48P09326 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.65■□□□□ 0.42
CD48P09326 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CD48P09326 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.65■□□□□ 0.42
CD48P09326 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.65■□□□□ 0.42
CD48P09326 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.65■□□□□ 0.42
CD48P09326 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.65■□□□□ 0.42
CD48P09326 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CD48P09326 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD48P09326 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CD48P09326 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.64■□□□□ 0.42
CD48P09326 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CD48P09326 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CD48P09326 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.42
CD48P09326 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.64■□□□□ 0.41
CD48P09326 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.64■□□□□ 0.41
CD48P09326 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.64■□□□□ 0.41
CD48P09326 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.64■□□□□ 0.41
CD48P09326 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 PTCHD3P3-201ENST00000403073 906 ntBASIC17.64■□□□□ 0.41
CD48P09326 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.64■□□□□ 0.41
CD48P09326 ELK2BP-201ENST00000415014 1224 ntBASIC17.64■□□□□ 0.41
CD48P09326 RPS2P1-201ENST00000434010 821 ntBASIC17.64■□□□□ 0.41
CD48P09326 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.64■□□□□ 0.41
CD48P09326 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.64■□□□□ 0.41
CD48P09326 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.64■□□□□ 0.41
CD48P09326 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.64■□□□□ 0.41
CD48P09326 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.64■□□□□ 0.41
CD48P09326 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CD48P09326 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD48P09326 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.64■□□□□ 0.41
CD48P09326 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms