Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.17■□□□□ 0.02
ERCC1P07992 FAM220CP-201ENST00000395253 831 ntBASIC15.17■□□□□ 0.02
ERCC1P07992 RCN1P2-201ENST00000398357 915 ntBASIC15.17■□□□□ 0.02
ERCC1P07992 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
ERCC1P07992 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 AC073648.2-201ENST00000510116 352 ntBASIC15.17■□□□□ 0.02
ERCC1P07992 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC1P07992 AC005336.2-201ENST00000593183 939 ntBASIC15.17■□□□□ 0.02
ERCC1P07992 AC011467.2-201ENST00000598425 242 ntBASIC15.17■□□□□ 0.02
ERCC1P07992 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC1P07992 UBALD1-205ENST00000590891 2641 ntBASIC15.17■□□□□ 0.02
ERCC1P07992 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC1P07992 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
ERCC1P07992 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ERCC1P07992 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ERCC1P07992 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC1P07992 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC1P07992 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ERCC1P07992 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ERCC1P07992 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.16■□□□□ 0.02
ERCC1P07992 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ERCC1P07992 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC1P07992 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ERCC1P07992 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC1P07992 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ERCC1P07992 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC1P07992 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ERCC1P07992 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ERCC1P07992 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.16■□□□□ 0.02
ERCC1P07992 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC1P07992 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 FDX1P1-201ENST00000449115 551 ntBASIC15.16■□□□□ 0.02
ERCC1P07992 AC132008.2-207ENST00000454517 770 ntBASIC15.16■□□□□ 0.02
ERCC1P07992 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.16■□□□□ 0.02
ERCC1P07992 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.16■□□□□ 0.02
ERCC1P07992 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.16■□□□□ 0.02
ERCC1P07992 AP002469.2-201ENST00000531724 424 ntBASIC15.16■□□□□ 0.02
ERCC1P07992 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.16■□□□□ 0.02
ERCC1P07992 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC1P07992 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ERCC1P07992 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ERCC1P07992 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
ERCC1P07992 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 AC008894.3-201ENST00000624324 3103 ntBASIC15.16■□□□□ 0.02
ERCC1P07992 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ERCC1P07992 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ERCC1P07992 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC1P07992 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC1P07992 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
ERCC1P07992 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC1P07992 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ERCC1P07992 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ERCC1P07992 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ERCC1P07992 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 MYCLP1-201ENST00000372451 1075 ntBASIC15.15■□□□□ 0.02
ERCC1P07992 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC1P07992 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC1P07992 AC079781.3-201ENST00000449110 356 ntBASIC15.15■□□□□ 0.02
ERCC1P07992 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
ERCC1P07992 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.15■□□□□ 0.02
ERCC1P07992 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.15■□□□□ 0.02
ERCC1P07992 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms