Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.71■□□□□ 0.75
MYCNP04198 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MYCNP04198 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC19.71■□□□□ 0.75
MYCNP04198 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC19.71■□□□□ 0.75
MYCNP04198 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 IGHV3-65-201ENST00000523210 341 ntBASIC19.71■□□□□ 0.75
MYCNP04198 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.71■□□□□ 0.75
MYCNP04198 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MYCNP04198 AC004449.1-201ENST00000564240 433 ntBASIC19.71■□□□□ 0.75
MYCNP04198 AL031432.2-201ENST00000566714 459 ntBASIC19.71■□□□□ 0.75
MYCNP04198 AL928711.1-201ENST00000570165 459 ntBASIC19.71■□□□□ 0.75
MYCNP04198 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC19.71■□□□□ 0.75
MYCNP04198 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.71■□□□□ 0.75
MYCNP04198 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.71■□□□□ 0.75
MYCNP04198 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.71■□□□□ 0.75
MYCNP04198 AC008667.4-201ENST00000607370 168 ntBASIC19.71■□□□□ 0.75
MYCNP04198 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.71■□□□□ 0.75
MYCNP04198 AC243960.7-201ENST00000623532 707 ntBASIC19.71■□□□□ 0.75
MYCNP04198 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.71■□□□□ 0.75
MYCNP04198 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.71■□□□□ 0.75
MYCNP04198 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
MYCNP04198 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.71■□□□□ 0.75
MYCNP04198 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
MYCNP04198 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.71■□□□□ 0.75
MYCNP04198 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MYCNP04198 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.7■□□□□ 0.74
MYCNP04198 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MYCNP04198 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.7■□□□□ 0.74
MYCNP04198 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.7■□□□□ 0.74
MYCNP04198 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.7■□□□□ 0.74
MYCNP04198 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
MYCNP04198 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC19.7■□□□□ 0.74
MYCNP04198 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.7■□□□□ 0.74
MYCNP04198 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.7■□□□□ 0.74
MYCNP04198 COX5BP2-201ENST00000392354 334 ntBASIC19.7■□□□□ 0.74
MYCNP04198 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MYCNP04198 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.7■□□□□ 0.74
MYCNP04198 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC19.7■□□□□ 0.74
MYCNP04198 LUZP4P1-201ENST00000415420 344 ntBASIC19.7■□□□□ 0.74
MYCNP04198 MTATP6P11-201ENST00000428071 670 ntBASIC19.7■□□□□ 0.74
MYCNP04198 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.7■□□□□ 0.74
MYCNP04198 FAM58CP-201ENST00000435741 640 ntBASIC19.7■□□□□ 0.74
MYCNP04198 MKNK2P1-201ENST00000437526 628 ntBASIC19.7■□□□□ 0.74
MYCNP04198 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.7■□□□□ 0.74
MYCNP04198 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 SIGLEC30P-201ENST00000455569 941 ntBASIC19.7■□□□□ 0.74
MYCNP04198 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC19.7■□□□□ 0.74
MYCNP04198 AC090680.1-201ENST00000464696 860 ntBASIC19.7■□□□□ 0.74
MYCNP04198 AC106868.1-201ENST00000505272 992 ntBASIC19.7■□□□□ 0.74
MYCNP04198 AC010460.2-201ENST00000509054 677 ntBASIC19.7■□□□□ 0.74
MYCNP04198 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.7■□□□□ 0.74
MYCNP04198 AP002981.1-201ENST00000517692 975 ntBASIC19.7■□□□□ 0.74
MYCNP04198 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC19.7■□□□□ 0.74
MYCNP04198 AC239868.3-201ENST00000577853 1234 ntBASIC19.7■□□□□ 0.74
MYCNP04198 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.7■□□□□ 0.74
MYCNP04198 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.7■□□□□ 0.74
MYCNP04198 AF230666.2-201ENST00000602328 725 ntBASIC19.7■□□□□ 0.74
MYCNP04198 AC017037.4-201ENST00000624526 826 ntBASIC19.7■□□□□ 0.74
MYCNP04198 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.7■□□□□ 0.74
MYCNP04198 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.7■□□□□ 0.74
MYCNP04198 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.7■□□□□ 0.74
MYCNP04198 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.7■□□□□ 0.74
MYCNP04198 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
MYCNP04198 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MYCNP04198 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MYCNP04198 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MYCNP04198 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.69■□□□□ 0.74
MYCNP04198 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MYCNP04198 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MYCNP04198 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MYCNP04198 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MYCNP04198 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms