Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.46□□□□□ -0.74
APOBP04114 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOBP04114 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC10.46□□□□□ -0.74
APOBP04114 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
APOBP04114 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOBP04114 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.46□□□□□ -0.74
APOBP04114 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
APOBP04114 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOBP04114 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
APOBP04114 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.46□□□□□ -0.74
APOBP04114 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC10.46□□□□□ -0.74
APOBP04114 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.46□□□□□ -0.74
APOBP04114 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.46□□□□□ -0.74
APOBP04114 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC10.46□□□□□ -0.74
APOBP04114 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC10.46□□□□□ -0.74
APOBP04114 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC10.46□□□□□ -0.74
APOBP04114 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC10.46□□□□□ -0.74
APOBP04114 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC10.46□□□□□ -0.74
APOBP04114 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOBP04114 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
APOBP04114 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
APOBP04114 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
APOBP04114 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC10.45□□□□□ -0.74
APOBP04114 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC10.45□□□□□ -0.74
APOBP04114 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 AC055876.2-201ENST00000531834 546 ntBASIC10.45□□□□□ -0.74
APOBP04114 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.45□□□□□ -0.74
APOBP04114 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.45□□□□□ -0.74
APOBP04114 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 AC020907.1-201ENST00000616460 1350 ntBASIC10.45□□□□□ -0.74
APOBP04114 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
APOBP04114 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC10.45□□□□□ -0.74
APOBP04114 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC10.45□□□□□ -0.74
APOBP04114 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC10.45□□□□□ -0.74
APOBP04114 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.45□□□□□ -0.74
APOBP04114 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC10.45□□□□□ -0.74
APOBP04114 AC123567.1-201ENST00000548294 1261 ntBASIC10.45□□□□□ -0.74
APOBP04114 AP005482.1-201ENST00000563722 1273 ntBASIC10.45□□□□□ -0.74
APOBP04114 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 SLC25A24-204ENST00000569674 2357 ntBASIC10.45□□□□□ -0.74
APOBP04114 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC10.45□□□□□ -0.74
APOBP04114 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.45□□□□□ -0.74
APOBP04114 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC10.45□□□□□ -0.74
APOBP04114 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
APOBP04114 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
APOBP04114 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC10.45□□□□□ -0.74
APOBP04114 TMEM261P1-201ENST00000604899 340 ntBASIC10.45□□□□□ -0.74
APOBP04114 AC007431.3-201ENST00000623221 587 ntBASIC10.45□□□□□ -0.74
APOBP04114 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
APOBP04114 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC10.45□□□□□ -0.74
APOBP04114 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC10.45□□□□□ -0.74
APOBP04114 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC10.45□□□□□ -0.74
APOBP04114 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
APOBP04114 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
APOBP04114 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOBP04114 ELK2AP-201ENST00000392510 1007 ntBASIC10.45□□□□□ -0.74
APOBP04114 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC10.45□□□□□ -0.74
APOBP04114 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC10.45□□□□□ -0.74
APOBP04114 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC10.45□□□□□ -0.74
APOBP04114 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.45□□□□□ -0.74
APOBP04114 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.45□□□□□ -0.74
APOBP04114 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
APOBP04114 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC10.44□□□□□ -0.74
APOBP04114 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC10.44□□□□□ -0.74
APOBP04114 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC10.44□□□□□ -0.74
APOBP04114 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC10.44□□□□□ -0.74
APOBP04114 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.44□□□□□ -0.74
APOBP04114 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC10.44□□□□□ -0.74
APOBP04114 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC10.44□□□□□ -0.74
APOBP04114 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC10.44□□□□□ -0.74
APOBP04114 AL512361.1-201ENST00000554200 418 ntBASIC10.44□□□□□ -0.74
APOBP04114 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC10.44□□□□□ -0.74
APOBP04114 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.44□□□□□ -0.74
APOBP04114 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOBP04114 AL035456.1-201ENST00000456064 1369 ntBASIC10.44□□□□□ -0.74
APOBP04114 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms