Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 SLC7A15P-201ENST00000424028 1363 ntBASIC19.24■□□□□ 0.67
ALDH1A1P00352 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 RN7SL837P-201ENST00000463010 287 ntBASIC19.24■□□□□ 0.67
ALDH1A1P00352 RN7SL618P-201ENST00000477850 296 ntBASIC19.24■□□□□ 0.67
ALDH1A1P00352 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 AC055876.2-201ENST00000531834 546 ntBASIC19.24■□□□□ 0.67
ALDH1A1P00352 AL079307.3-201ENST00000556114 283 ntBASIC19.24■□□□□ 0.67
ALDH1A1P00352 AC105021.1-202ENST00000570572 669 ntBASIC19.24■□□□□ 0.67
ALDH1A1P00352 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 MPDU1-223ENST00000582151 728 ntBASIC19.24■□□□□ 0.67
ALDH1A1P00352 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 COX11-210ENST00000639671 696 ntBASIC19.24■□□□□ 0.67
ALDH1A1P00352 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALDH1A1P00352 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ALDH1A1P00352 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.24■□□□□ 0.67
ALDH1A1P00352 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 AL080243.2-201ENST00000418783 582 ntBASIC19.23■□□□□ 0.67
ALDH1A1P00352 MEP1AP4-201ENST00000423244 1087 ntBASIC19.23■□□□□ 0.67
ALDH1A1P00352 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 AC133552.6-201ENST00000613406 534 ntBASIC19.23■□□□□ 0.67
ALDH1A1P00352 SPTSSB-204ENST00000617024 1292 ntBASIC19.23■□□□□ 0.67
ALDH1A1P00352 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 FOXO1B-201ENST00000504678 1527 ntBASIC19.23■□□□□ 0.67
ALDH1A1P00352 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.23■□□□□ 0.67
ALDH1A1P00352 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALDH1A1P00352 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 KRT223P-202ENST00000449164 1292 ntBASIC19.22■□□□□ 0.67
ALDH1A1P00352 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms