Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH8O95206 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH8O95206 EGFEM1P-202ENST00000431685 1563 ntBASIC17.01■□□□□ 0.31
PCDH8O95206 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH8O95206 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH8O95206 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH8O95206 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDH8O95206 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH8O95206 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH8O95206 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH8O95206 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH8O95206 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH8O95206 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDH8O95206 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17■□□□□ 0.31
PCDH8O95206 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17■□□□□ 0.31
PCDH8O95206 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDH8O95206 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDH8O95206 DDT-204ENST00000404092 805 ntTSL 3 BASIC17■□□□□ 0.31
PCDH8O95206 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17■□□□□ 0.31
PCDH8O95206 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 AC107918.2-201ENST00000530817 355 ntBASIC17■□□□□ 0.31
PCDH8O95206 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17■□□□□ 0.31
PCDH8O95206 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17■□□□□ 0.31
PCDH8O95206 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 AL031432.2-201ENST00000566714 459 ntBASIC17■□□□□ 0.31
PCDH8O95206 AL928711.1-201ENST00000570165 459 ntBASIC17■□□□□ 0.31
PCDH8O95206 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17■□□□□ 0.31
PCDH8O95206 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17■□□□□ 0.31
PCDH8O95206 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17■□□□□ 0.31
PCDH8O95206 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDH8O95206 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PCDH8O95206 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDH8O95206 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17■□□□□ 0.31
PCDH8O95206 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDH8O95206 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17■□□□□ 0.31
PCDH8O95206 NOC2LP2-201ENST00000407594 1944 ntBASIC17■□□□□ 0.31
PCDH8O95206 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH8O95206 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH8O95206 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 AC068880.1-201ENST00000507289 2297 ntBASIC16.99■□□□□ 0.31
PCDH8O95206 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDH8O95206 AC254562.1-201ENST00000417586 456 ntBASIC16.99■□□□□ 0.31
PCDH8O95206 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH8O95206 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH8O95206 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH8O95206 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH8O95206 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH8O95206 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PCDH8O95206 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
PCDH8O95206 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDH8O95206 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PCDH8O95206 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 AC067852.2-201ENST00000590513 2313 ntBASIC16.99■□□□□ 0.31
PCDH8O95206 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCDH8O95206 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH8O95206 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 AC092919.2-201ENST00000623631 1645 ntBASIC16.99■□□□□ 0.31
PCDH8O95206 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH8O95206 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH8O95206 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCDH8O95206 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH8O95206 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 467.7 ms