Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.94■□□□□ 0.62
CLSTN1O94985 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLSTN1O94985 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLSTN1O94985 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CLSTN1O94985 AC103564.2-201ENST00000432853 1299 ntBASIC18.94■□□□□ 0.62
CLSTN1O94985 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.94■□□□□ 0.62
CLSTN1O94985 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLSTN1O94985 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.94■□□□□ 0.62
CLSTN1O94985 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLSTN1O94985 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.94■□□□□ 0.62
CLSTN1O94985 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLSTN1O94985 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 AC133963.1-201ENST00000504166 1679 ntBASIC18.94■□□□□ 0.62
CLSTN1O94985 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.94■□□□□ 0.62
CLSTN1O94985 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLSTN1O94985 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
CLSTN1O94985 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLSTN1O94985 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLSTN1O94985 NKILA-202ENST00000614771 2598 ntBASIC18.93■□□□□ 0.62
CLSTN1O94985 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.93■□□□□ 0.62
CLSTN1O94985 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.93■□□□□ 0.62
CLSTN1O94985 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.93■□□□□ 0.62
CLSTN1O94985 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLSTN1O94985 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 KLF4P1-201ENST00000412782 1185 ntBASIC18.93■□□□□ 0.62
CLSTN1O94985 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.93■□□□□ 0.62
CLSTN1O94985 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.93■□□□□ 0.62
CLSTN1O94985 AL691432.3-201ENST00000621860 400 ntBASIC18.93■□□□□ 0.62
CLSTN1O94985 INTS4P1-201ENST00000438455 1935 ntBASIC18.93■□□□□ 0.62
CLSTN1O94985 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.93■□□□□ 0.62
CLSTN1O94985 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLSTN1O94985 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.93■□□□□ 0.62
CLSTN1O94985 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CLSTN1O94985 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.93■□□□□ 0.62
CLSTN1O94985 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLSTN1O94985 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.93■□□□□ 0.62
CLSTN1O94985 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLSTN1O94985 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLSTN1O94985 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CLSTN1O94985 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLSTN1O94985 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.92■□□□□ 0.62
CLSTN1O94985 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.92■□□□□ 0.62
CLSTN1O94985 AC122714.2-201ENST00000502787 707 ntBASIC18.92■□□□□ 0.62
CLSTN1O94985 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.92■□□□□ 0.62
CLSTN1O94985 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.92■□□□□ 0.62
CLSTN1O94985 LINC01451-201ENST00000623792 534 ntBASIC18.92■□□□□ 0.62
CLSTN1O94985 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLSTN1O94985 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.92■□□□□ 0.62
CLSTN1O94985 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.92■□□□□ 0.62
CLSTN1O94985 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLSTN1O94985 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.91■□□□□ 0.62
CLSTN1O94985 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms