Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
USH2AO75445 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
USH2AO75445 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC7.5□□□□□ -1.21
USH2AO75445 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC7.5□□□□□ -1.21
USH2AO75445 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC7.5□□□□□ -1.21
USH2AO75445 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC7.5□□□□□ -1.21
USH2AO75445 AP003419.4-201ENST00000616071 517 ntBASIC7.5□□□□□ -1.21
USH2AO75445 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC7.5□□□□□ -1.21
USH2AO75445 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USH2AO75445 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC7.49□□□□□ -1.21
USH2AO75445 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC7.49□□□□□ -1.21
USH2AO75445 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 AC002558.1-201ENST00000488906 803 ntBASIC7.49□□□□□ -1.21
USH2AO75445 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC7.49□□□□□ -1.21
USH2AO75445 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC7.49□□□□□ -1.21
USH2AO75445 AL365330.1-201ENST00000607459 531 ntBASIC7.49□□□□□ -1.21
USH2AO75445 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 AC012569.1-201ENST00000591191 1524 ntBASIC7.49□□□□□ -1.21
USH2AO75445 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC7.49□□□□□ -1.21
USH2AO75445 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC7.49□□□□□ -1.21
USH2AO75445 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 HCG18-245ENST00000602550 559 ntTSL 4 BASIC7.49□□□□□ -1.21
USH2AO75445 MIR6756-201ENST00000616240 63 ntBASIC7.49□□□□□ -1.21
USH2AO75445 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC7.49□□□□□ -1.21
USH2AO75445 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC7.49□□□□□ -1.21
USH2AO75445 AL020996.1-203ENST00000536896 2307 ntBASIC7.49□□□□□ -1.21
USH2AO75445 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
USH2AO75445 KRT18P66-201ENST00000452970 1269 ntBASIC7.49□□□□□ -1.21
USH2AO75445 RN7SL769P-201ENST00000469386 295 ntBASIC7.49□□□□□ -1.21
USH2AO75445 TSACC-208ENST00000481479 741 ntTSL 2 BASIC7.49□□□□□ -1.21
USH2AO75445 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC7.49□□□□□ -1.21
USH2AO75445 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC7.49□□□□□ -1.21
USH2AO75445 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 AC093726.1-201ENST00000608064 963 ntBASIC7.49□□□□□ -1.21
USH2AO75445 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC7.49□□□□□ -1.21
USH2AO75445 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC7.49□□□□□ -1.21
USH2AO75445 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 RPL7P3-201ENST00000441388 714 ntBASIC7.49□□□□□ -1.21
USH2AO75445 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC7.49□□□□□ -1.21
USH2AO75445 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC7.49□□□□□ -1.21
USH2AO75445 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
USH2AO75445 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
USH2AO75445 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USH2AO75445 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 AC104581.1-202ENST00000635932 2618 ntBASIC7.48□□□□□ -1.21
USH2AO75445 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
USH2AO75445 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms