Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH16O75309 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CDH16O75309 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH16O75309 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH16O75309 FAM210CP-201ENST00000445714 574 ntBASIC17.27■□□□□ 0.36
CDH16O75309 AC092597.1-201ENST00000487352 616 ntBASIC17.27■□□□□ 0.36
CDH16O75309 AC005332.3-201ENST00000589904 676 ntBASIC17.27■□□□□ 0.36
CDH16O75309 AL390719.2-201ENST00000606993 987 ntBASIC17.27■□□□□ 0.36
CDH16O75309 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDH16O75309 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDH16O75309 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH16O75309 KRT8P10-201ENST00000450021 1447 ntBASIC17.27■□□□□ 0.35
CDH16O75309 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH16O75309 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH16O75309 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH16O75309 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH16O75309 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH16O75309 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH16O75309 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH16O75309 PAUPAR-201ENST00000630360 2965 ntBASIC17.27■□□□□ 0.35
CDH16O75309 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.27■□□□□ 0.35
CDH16O75309 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH16O75309 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH16O75309 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH16O75309 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH16O75309 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.26■□□□□ 0.35
CDH16O75309 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH16O75309 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH16O75309 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH16O75309 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDH16O75309 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH16O75309 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH16O75309 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH16O75309 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH16O75309 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CDH16O75309 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH16O75309 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 ME2P1-201ENST00000426028 1970 ntBASIC17.26■□□□□ 0.35
CDH16O75309 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH16O75309 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDH16O75309 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDH16O75309 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH16O75309 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH16O75309 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 AC009336.1-201ENST00000608941 1553 ntBASIC17.25■□□□□ 0.35
CDH16O75309 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.25■□□□□ 0.35
CDH16O75309 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 COX11P1-201ENST00000489116 835 ntBASIC17.25■□□□□ 0.35
CDH16O75309 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.25■□□□□ 0.35
CDH16O75309 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH16O75309 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.25■□□□□ 0.35
CDH16O75309 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDH16O75309 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDH16O75309 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH16O75309 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDH16O75309 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms