Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LCMT2O60294 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.31■□□□□ 0.2
LCMT2O60294 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.31■□□□□ 0.2
LCMT2O60294 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LCMT2O60294 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
LCMT2O60294 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
LCMT2O60294 AC002310.6-201ENST00000624451 1377 ntBASIC16.3■□□□□ 0.2
LCMT2O60294 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LCMT2O60294 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 OR6D1P-202ENST00000641007 5290 ntBASIC16.3■□□□□ 0.2
LCMT2O60294 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 AC009947.1-201ENST00000444350 727 ntBASIC16.3■□□□□ 0.2
LCMT2O60294 RPL13AP23-201ENST00000480739 586 ntBASIC16.3■□□□□ 0.2
LCMT2O60294 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.3■□□□□ 0.2
LCMT2O60294 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.3■□□□□ 0.2
LCMT2O60294 OR7E47P-204ENST00000575924 449 ntBASIC16.3■□□□□ 0.2
LCMT2O60294 BX640515.1-201ENST00000617215 977 ntBASIC16.3■□□□□ 0.2
LCMT2O60294 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 PCDHB17P-201ENST00000539533 2393 ntBASIC16.3■□□□□ 0.2
LCMT2O60294 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.3■□□□□ 0.2
LCMT2O60294 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.3■□□□□ 0.2
LCMT2O60294 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LCMT2O60294 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
LCMT2O60294 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 AC105020.1-201ENST00000435356 2205 ntBASIC16.3■□□□□ 0.2
LCMT2O60294 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
LCMT2O60294 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCMT2O60294 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LCMT2O60294 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LCMT2O60294 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.29■□□□□ 0.2
LCMT2O60294 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.29■□□□□ 0.2
LCMT2O60294 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LCMT2O60294 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.29■□□□□ 0.2
LCMT2O60294 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
LCMT2O60294 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.29■□□□□ 0.2
LCMT2O60294 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.29■□□□□ 0.2
LCMT2O60294 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.29■□□□□ 0.2
LCMT2O60294 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 AC108751.1-201ENST00000490852 363 ntBASIC16.29■□□□□ 0.2
LCMT2O60294 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.29■□□□□ 0.2
LCMT2O60294 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
LCMT2O60294 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.29■□□□□ 0.2
LCMT2O60294 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.29■□□□□ 0.2
LCMT2O60294 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
LCMT2O60294 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 AD000864.1-201ENST00000624076 2295 ntBASIC16.29■□□□□ 0.2
LCMT2O60294 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCMT2O60294 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.29■□□□□ 0.2
LCMT2O60294 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
LCMT2O60294 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.28■□□□□ 0.2
LCMT2O60294 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.28■□□□□ 0.2
LCMT2O60294 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.28■□□□□ 0.2
LCMT2O60294 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
LCMT2O60294 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LCMT2O60294 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LCMT2O60294 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.28■□□□□ 0.2
LCMT2O60294 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.28■□□□□ 0.2
LCMT2O60294 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.28■□□□□ 0.2
LCMT2O60294 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.28■□□□□ 0.2
LCMT2O60294 SLC25A1P1-201ENST00000528351 927 ntBASIC16.28■□□□□ 0.2
LCMT2O60294 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.28■□□□□ 0.2
LCMT2O60294 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
LCMT2O60294 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LCMT2O60294 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms