Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PRKNO60260 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKNO60260 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKNO60260 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKNO60260 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKNO60260 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKNO60260 VN2R19P-201ENST00000442399 1052 ntBASIC15.87■□□□□ 0.13
PRKNO60260 KRT18P3-201ENST00000451602 1288 ntBASIC15.87■□□□□ 0.13
PRKNO60260 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.87■□□□□ 0.13
PRKNO60260 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKNO60260 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.87■□□□□ 0.13
PRKNO60260 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKNO60260 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKNO60260 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKNO60260 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKNO60260 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKNO60260 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKNO60260 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.87■□□□□ 0.13
PRKNO60260 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
PRKNO60260 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKNO60260 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
PRKNO60260 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.86■□□□□ 0.13
PRKNO60260 PCDHA12-202ENST00000613593 2588 ntBASIC15.86■□□□□ 0.13
PRKNO60260 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.86■□□□□ 0.13
PRKNO60260 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PRKNO60260 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.86■□□□□ 0.13
PRKNO60260 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PRKNO60260 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.86■□□□□ 0.13
PRKNO60260 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 MRPL20P1-201ENST00000400819 433 ntBASIC15.86■□□□□ 0.13
PRKNO60260 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PRKNO60260 CRYGEP-201ENST00000412192 528 ntBASIC15.86■□□□□ 0.13
PRKNO60260 IGLL3P-201ENST00000412472 434 ntBASIC15.86■□□□□ 0.13
PRKNO60260 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.86■□□□□ 0.13
PRKNO60260 HCG4B-203ENST00000450128 991 ntBASIC15.86■□□□□ 0.13
PRKNO60260 SLC25A6P2-201ENST00000497974 877 ntBASIC15.86■□□□□ 0.13
PRKNO60260 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.86■□□□□ 0.13
PRKNO60260 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.86■□□□□ 0.13
PRKNO60260 GGTLC5P-201ENST00000617623 998 ntBASIC15.86■□□□□ 0.13
PRKNO60260 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.86■□□□□ 0.13
PRKNO60260 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.86■□□□□ 0.13
PRKNO60260 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.86■□□□□ 0.13
PRKNO60260 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRKNO60260 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.85■□□□□ 0.13
PRKNO60260 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
PRKNO60260 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PRKNO60260 LINC02012-201ENST00000608206 1725 ntBASIC15.85■□□□□ 0.13
PRKNO60260 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.85■□□□□ 0.13
PRKNO60260 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PRKNO60260 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 PRSS29P-201ENST00000440800 595 ntBASIC15.85■□□□□ 0.13
PRKNO60260 AL591424.1-201ENST00000442569 1213 ntBASIC15.85■□□□□ 0.13
PRKNO60260 AC087163.2-201ENST00000457299 853 ntBASIC15.85■□□□□ 0.13
PRKNO60260 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.85■□□□□ 0.13
PRKNO60260 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.85■□□□□ 0.13
PRKNO60260 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.85■□□□□ 0.13
PRKNO60260 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.85■□□□□ 0.13
PRKNO60260 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.85■□□□□ 0.13
PRKNO60260 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.85■□□□□ 0.13
PRKNO60260 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 PMS2P7-201ENST00000506558 1336 ntBASIC15.85■□□□□ 0.13
PRKNO60260 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
PRKNO60260 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.85■□□□□ 0.13
PRKNO60260 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKNO60260 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms