Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC28A2O43868 AC025062.2-201ENST00000605477 670 ntBASIC16.48■□□□□ 0.23
SLC28A2O43868 MIR1199-201ENST00000621445 119 ntBASIC16.48■□□□□ 0.23
SLC28A2O43868 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC28A2O43868 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.48■□□□□ 0.23
SLC28A2O43868 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC28A2O43868 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC28A2O43868 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC28A2O43868 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SLC28A2O43868 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC28A2O43868 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC28A2O43868 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC28A2O43868 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC28A2O43868 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SLC28A2O43868 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC28A2O43868 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 AC009947.1-201ENST00000444350 727 ntBASIC16.47■□□□□ 0.23
SLC28A2O43868 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.47■□□□□ 0.23
SLC28A2O43868 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC28A2O43868 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC28A2O43868 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC28A2O43868 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC28A2O43868 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC28A2O43868 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC28A2O43868 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC28A2O43868 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC28A2O43868 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC28A2O43868 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC28A2O43868 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC28A2O43868 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SLC28A2O43868 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SLC28A2O43868 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC28A2O43868 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
SLC28A2O43868 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC28A2O43868 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC28A2O43868 BCRP1-201ENST00000444246 691 ntBASIC16.46■□□□□ 0.23
SLC28A2O43868 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC28A2O43868 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SLC28A2O43868 AC068472.1-201ENST00000474589 881 ntBASIC16.46■□□□□ 0.23
SLC28A2O43868 ALG1L5P-201ENST00000482043 771 ntBASIC16.46■□□□□ 0.23
SLC28A2O43868 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC28A2O43868 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 AC009533.2-201ENST00000543664 586 ntBASIC16.46■□□□□ 0.23
SLC28A2O43868 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 AL096865.1-201ENST00000606796 927 ntBASIC16.46■□□□□ 0.23
SLC28A2O43868 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms