Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDB2O43679 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 PI4KAP1-204ENST00000612579 1703 ntBASIC17.04■□□□□ 0.32
LDB2O43679 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 AL021920.2-201ENST00000624828 1351 ntBASIC17.04■□□□□ 0.32
LDB2O43679 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LDB2O43679 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LDB2O43679 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 AC087163.2-201ENST00000457299 853 ntBASIC17.04■□□□□ 0.32
LDB2O43679 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.04■□□□□ 0.32
LDB2O43679 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.04■□□□□ 0.32
LDB2O43679 RPS15P9-201ENST00000494093 319 ntBASIC17.04■□□□□ 0.32
LDB2O43679 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.04■□□□□ 0.32
LDB2O43679 AC136632.2-201ENST00000512891 861 ntBASIC17.04■□□□□ 0.32
LDB2O43679 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.04■□□□□ 0.32
LDB2O43679 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.04■□□□□ 0.32
LDB2O43679 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
LDB2O43679 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.04■□□□□ 0.32
LDB2O43679 FAM215A-202ENST00000632077 792 ntBASIC17.04■□□□□ 0.32
LDB2O43679 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.04■□□□□ 0.32
LDB2O43679 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.04■□□□□ 0.32
LDB2O43679 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.04■□□□□ 0.32
LDB2O43679 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.04■□□□□ 0.32
LDB2O43679 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 KRT8P49-201ENST00000604166 1432 ntBASIC17.04■□□□□ 0.32
LDB2O43679 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDB2O43679 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.04■□□□□ 0.32
LDB2O43679 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDB2O43679 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.03■□□□□ 0.32
LDB2O43679 AC084018.2-201ENST00000613093 2607 ntBASIC17.03■□□□□ 0.32
LDB2O43679 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDB2O43679 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDB2O43679 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LDB2O43679 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.03■□□□□ 0.32
LDB2O43679 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LDB2O43679 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LDB2O43679 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDB2O43679 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.03■□□□□ 0.32
LDB2O43679 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDB2O43679 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.03■□□□□ 0.32
LDB2O43679 AC105339.3-201ENST00000560043 636 ntBASIC17.03■□□□□ 0.32
LDB2O43679 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LDB2O43679 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LDB2O43679 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 AP002414.3-201ENST00000589352 1468 ntBASIC17.03■□□□□ 0.32
LDB2O43679 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LDB2O43679 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
LDB2O43679 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
LDB2O43679 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.03■□□□□ 0.32
LDB2O43679 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LDB2O43679 AC002310.6-201ENST00000624451 1377 ntBASIC17.02■□□□□ 0.32
LDB2O43679 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.02■□□□□ 0.32
LDB2O43679 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB2O43679 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.02■□□□□ 0.32
LDB2O43679 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB2O43679 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LDB2O43679 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
LDB2O43679 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB2O43679 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.02■□□□□ 0.32
LDB2O43679 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LDB2O43679 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.02■□□□□ 0.32
LDB2O43679 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LDB2O43679 MRPL3P1-201ENST00000400109 1033 ntBASIC17.02■□□□□ 0.32
LDB2O43679 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.02■□□□□ 0.32
LDB2O43679 RNA5SP419-201ENST00000515908 135 ntBASIC17.02■□□□□ 0.32
LDB2O43679 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.02■□□□□ 0.32
LDB2O43679 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.02■□□□□ 0.32
LDB2O43679 AL356488.2-201ENST00000602755 427 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms