Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
RTL8CO15255 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
RTL8CO15255 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RTL8CO15255 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.33□□□□□ -0.6
RTL8CO15255 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.33□□□□□ -0.6
RTL8CO15255 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.33□□□□□ -0.6
RTL8CO15255 SPDYE7P-202ENST00000420373 878 ntBASIC11.33□□□□□ -0.6
RTL8CO15255 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 CRB3P1-201ENST00000449338 276 ntBASIC11.33□□□□□ -0.6
RTL8CO15255 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.33□□□□□ -0.6
RTL8CO15255 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.33□□□□□ -0.6
RTL8CO15255 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.33□□□□□ -0.6
RTL8CO15255 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.33□□□□□ -0.6
RTL8CO15255 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.33□□□□□ -0.6
RTL8CO15255 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 AL158211.3-201ENST00000607385 239 ntBASIC11.33□□□□□ -0.6
RTL8CO15255 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RTL8CO15255 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC11.33□□□□□ -0.6
RTL8CO15255 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC11.33□□□□□ -0.6
RTL8CO15255 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.33□□□□□ -0.6
RTL8CO15255 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RTL8CO15255 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RTL8CO15255 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
RTL8CO15255 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.33□□□□□ -0.6
RTL8CO15255 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC11.32□□□□□ -0.6
RTL8CO15255 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
RTL8CO15255 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.32□□□□□ -0.6
RTL8CO15255 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.32□□□□□ -0.6
RTL8CO15255 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.32□□□□□ -0.6
RTL8CO15255 MEIS3P1-201ENST00000495167 958 ntBASIC11.32□□□□□ -0.6
RTL8CO15255 AC097493.3-201ENST00000509725 367 ntBASIC11.32□□□□□ -0.6
RTL8CO15255 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.32□□□□□ -0.6
RTL8CO15255 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.32□□□□□ -0.6
RTL8CO15255 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 KRT8P23-201ENST00000560090 1207 ntBASIC11.32□□□□□ -0.6
RTL8CO15255 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.32□□□□□ -0.6
RTL8CO15255 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
RTL8CO15255 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.32□□□□□ -0.6
RTL8CO15255 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 AL008721.1-201ENST00000609964 604 ntBASIC11.32□□□□□ -0.6
RTL8CO15255 ABALON-201ENST00000629058 1903 ntBASIC11.32□□□□□ -0.6
RTL8CO15255 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.32□□□□□ -0.6
RTL8CO15255 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.32□□□□□ -0.6
RTL8CO15255 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC11.32□□□□□ -0.6
RTL8CO15255 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTL8CO15255 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC11.32□□□□□ -0.6
RTL8CO15255 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.32□□□□□ -0.6
RTL8CO15255 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RTL8CO15255 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RTL8CO15255 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RTL8CO15255 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.31□□□□□ -0.6
RTL8CO15255 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
RTL8CO15255 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RTL8CO15255 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
RTL8CO15255 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.31□□□□□ -0.6
RTL8CO15255 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RTL8CO15255 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RTL8CO15255 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC11.31□□□□□ -0.6
RTL8CO15255 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RTL8CO15255 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms