Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX1O00570 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX1O00570 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX1O00570 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX1O00570 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX1O00570 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX1O00570 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX1O00570 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX1O00570 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.94■□□□□ 0.46
SOX1O00570 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 AC046185.3-201ENST00000623228 1824 ntBASIC17.94■□□□□ 0.46
SOX1O00570 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX1O00570 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX1O00570 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SOX1O00570 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
SOX1O00570 AC253536.4-201ENST00000440539 267 ntBASIC17.94■□□□□ 0.46
SOX1O00570 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 KRT18P34-201ENST00000488218 1270 ntBASIC17.94■□□□□ 0.46
SOX1O00570 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.94■□□□□ 0.46
SOX1O00570 AC105021.1-202ENST00000570572 669 ntBASIC17.94■□□□□ 0.46
SOX1O00570 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.94■□□□□ 0.46
SOX1O00570 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX1O00570 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.94■□□□□ 0.46
SOX1O00570 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX1O00570 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX1O00570 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SOX1O00570 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX1O00570 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.93■□□□□ 0.46
SOX1O00570 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX1O00570 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 FAM21FP-201ENST00000426241 1131 ntBASIC17.93■□□□□ 0.46
SOX1O00570 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SOX1O00570 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.93■□□□□ 0.46
SOX1O00570 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.93■□□□□ 0.46
SOX1O00570 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.93■□□□□ 0.46
SOX1O00570 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX1O00570 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.93■□□□□ 0.46
SOX1O00570 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.93■□□□□ 0.46
SOX1O00570 AC093726.1-201ENST00000608064 963 ntBASIC17.93■□□□□ 0.46
SOX1O00570 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX1O00570 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX1O00570 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SOX1O00570 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX1O00570 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX1O00570 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX1O00570 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
SOX1O00570 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
SOX1O00570 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.92■□□□□ 0.46
SOX1O00570 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.92■□□□□ 0.46
SOX1O00570 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX1O00570 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.92■□□□□ 0.46
SOX1O00570 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
SOX1O00570 MIR3909-201ENST00000579518 119 ntBASIC17.92■□□□□ 0.46
SOX1O00570 MIR4706-201ENST00000582134 82 ntBASIC17.92■□□□□ 0.46
SOX1O00570 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.92■□□□□ 0.46
SOX1O00570 AC233724.13-201ENST00000598383 410 ntBASIC17.92■□□□□ 0.46
SOX1O00570 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX1O00570 AC015967.2-201ENST00000624092 234 ntBASIC17.92■□□□□ 0.46
SOX1O00570 AC006435.4-201ENST00000625037 234 ntBASIC17.92■□□□□ 0.46
SOX1O00570 AL356737.1-201ENST00000634391 234 ntBASIC17.92■□□□□ 0.46
SOX1O00570 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms