Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PALM3A6NDB9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PALM3A6NDB9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 AL121761.2-201ENST00000598007 1648 ntBASIC19.62■□□□□ 0.73
PALM3A6NDB9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 PCDHB17P-201ENST00000539533 2393 ntBASIC19.62■□□□□ 0.73
PALM3A6NDB9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 HMGA1P7-201ENST00000406908 502 ntBASIC19.62■□□□□ 0.73
PALM3A6NDB9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.62■□□□□ 0.73
PALM3A6NDB9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 AL645728.2-201ENST00000641974 660 ntBASIC19.62■□□□□ 0.73
PALM3A6NDB9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PALM3A6NDB9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PALM3A6NDB9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 MTDHP5-201ENST00000598980 586 ntBASIC19.61■□□□□ 0.73
PALM3A6NDB9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PALM3A6NDB9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.61■□□□□ 0.73
PALM3A6NDB9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 RPSAP43-201ENST00000402237 625 ntBASIC19.6■□□□□ 0.73
PALM3A6NDB9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 AC092865.5-201ENST00000545435 363 ntBASIC19.6■□□□□ 0.73
PALM3A6NDB9 AL031432.2-201ENST00000566714 459 ntBASIC19.6■□□□□ 0.73
PALM3A6NDB9 AL928711.1-201ENST00000570165 459 ntBASIC19.6■□□□□ 0.73
PALM3A6NDB9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.6■□□□□ 0.73
PALM3A6NDB9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PALM3A6NDB9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PALM3A6NDB9 AC131009.4-201ENST00000624048 1740 ntBASIC19.59■□□□□ 0.73
PALM3A6NDB9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.59■□□□□ 0.73
PALM3A6NDB9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.59■□□□□ 0.73
PALM3A6NDB9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PALM3A6NDB9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms