Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 AC022211.2-201ENST00000585075 2527 ntBASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 LINC02012-201ENST00000608206 1725 ntBASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 AL121761.2-201ENST00000598007 1648 ntBASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 PRELID1P1-202ENST00000567272 903 ntBASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 PMPCAP1-201ENST00000508114 1576 ntBASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 AC060834.1-201ENST00000443027 2032 ntBASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TRGV1A0A0A0MS02 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV1A0A0A0MS02 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms