Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 AC090164.3-201ENST00000610780 2143 ntBASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 PKD1P1-201ENST00000458669 6805 ntBASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA1Q9Y5H4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 AP000997.3-201ENST00000623333 2250 ntBASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 AC097493.3-201ENST00000509725 367 ntBASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 LINC01451-201ENST00000623792 534 ntBASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 WASH6P-202ENST00000359512 1437 ntBASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 AC009113.1-201ENST00000570267 2443 ntBASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA1Q9Y5H4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 AC020916.1-201ENST00000587762 1774 ntBASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.33■□□□□ 0.21
PCDHGA1Q9Y5H4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 CRB3P1-201ENST00000449338 276 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms