Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
USP15Q9Y4E8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP15Q9Y4E8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP15Q9Y4E8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
USP15Q9Y4E8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 AC148477.5-201ENST00000625164 1645 ntBASIC18.42■□□□□ 0.54
USP15Q9Y4E8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 MRPL20P1-201ENST00000400819 433 ntBASIC18.42■□□□□ 0.54
USP15Q9Y4E8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 HLA-J-203ENST00000494367 1087 ntBASIC18.42■□□□□ 0.54
USP15Q9Y4E8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 AC096734.2-201ENST00000562054 433 ntBASIC18.42■□□□□ 0.54
USP15Q9Y4E8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.42■□□□□ 0.54
USP15Q9Y4E8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.42■□□□□ 0.54
USP15Q9Y4E8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 AC011676.5-201ENST00000624864 2660 ntBASIC18.41■□□□□ 0.54
USP15Q9Y4E8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 PAWRP1-201ENST00000451083 565 ntBASIC18.41■□□□□ 0.54
USP15Q9Y4E8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 AC004835.2-201ENST00000603762 682 ntBASIC18.41■□□□□ 0.54
USP15Q9Y4E8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USP15Q9Y4E8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
USP15Q9Y4E8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms