Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 AL031432.2-201ENST00000566714 459 ntBASIC17.99■□□□□ 0.47
CDH9Q9ULB4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 AL928711.1-201ENST00000570165 459 ntBASIC17.99■□□□□ 0.47
CDH9Q9ULB4 AC091167.2-201ENST00000579581 588 ntBASIC17.99■□□□□ 0.47
CDH9Q9ULB4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 AC092053.1-201ENST00000605787 1936 ntBASIC17.99■□□□□ 0.47
CDH9Q9ULB4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.99■□□□□ 0.47
CDH9Q9ULB4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 AC005332.8-201ENST00000622750 2735 ntBASIC17.98■□□□□ 0.47
CDH9Q9ULB4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 AC005829.1-201ENST00000570002 483 ntBASIC17.98■□□□□ 0.47
CDH9Q9ULB4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 AC068137.2-201ENST00000605408 478 ntBASIC17.98■□□□□ 0.47
CDH9Q9ULB4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH9Q9ULB4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 MKNK2P1-201ENST00000437526 628 ntBASIC17.97■□□□□ 0.47
CDH9Q9ULB4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDH9Q9ULB4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms