Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MBD1Q9UIS9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD1Q9UIS9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.13■□□□□ 0.33
MBD1Q9UIS9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MBD1Q9UIS9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.12■□□□□ 0.33
MBD1Q9UIS9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 AL671277.1-201ENST00000429656 993 ntBASIC17.12■□□□□ 0.33
MBD1Q9UIS9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 DUX4L27-201ENST00000554796 1261 ntBASIC17.12■□□□□ 0.33
MBD1Q9UIS9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.12■□□□□ 0.33
MBD1Q9UIS9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MBD1Q9UIS9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 MIR4745-201ENST00000577608 62 ntBASIC17.11■□□□□ 0.33
MBD1Q9UIS9 AC138761.1-201ENST00000584393 385 ntBASIC17.11■□□□□ 0.33
MBD1Q9UIS9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 Z92544.3-201ENST00000624747 417 ntBASIC17.11■□□□□ 0.33
MBD1Q9UIS9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 AC129492.6-201ENST00000611383 1305 ntBASIC17.11■□□□□ 0.33
MBD1Q9UIS9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD1Q9UIS9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.1■□□□□ 0.33
MBD1Q9UIS9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 AC140658.5-201ENST00000438532 169 ntBASIC17.1■□□□□ 0.33
MBD1Q9UIS9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 AC015911.4-201ENST00000588022 1070 ntBASIC17.1■□□□□ 0.33
MBD1Q9UIS9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.1■□□□□ 0.33
MBD1Q9UIS9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms